Merge staging-next into staging

pkgs/applications/networking/cluster/kubectl/default.nix

@@ -1,27 +1,24 @@
-{ stdenv, kubernetes }:
+{ stdenv, kubernetes, installShellFiles }:
 
 stdenv.mkDerivation {
   name = "kubectl-${kubernetes.version}";
 
   # kubectl is currently part of the main distribution but will eventially be
   # split out (see homepage)
-  src = kubernetes;
+  dontUnpack = true;
+
+  nativeBuildInputs = [ installShellFiles ];
 
   outputs = [ "out" "man" ];
 
   installPhase = ''
-    mkdir -p \
-      "$out/bin" \
-      "$out/share/bash-completion/completions" \
-      "$out/share/zsh/site-functions" \
-      "$man/share/man/man1"
+    install -D ${kubernetes}/bin/kubectl -t $out/bin
 
-    cp bin/kubectl $out/bin/kubectl
+    installManPage "${kubernetes.man}/share/man/man1"/kubectl*
 
-    cp "${kubernetes.man}/share/man/man1"/kubectl* "$man/share/man/man1"
-
-    $out/bin/kubectl completion bash > $out/share/bash-completion/completions/kubectl
-    $out/bin/kubectl completion zsh > $out/share/zsh/site-functions/_kubectl
+    installShellCompletion --cmd kubectl \
+      --bash <($out/bin/kubectl completion bash) \
+      --zsh <($out/bin/kubectl completion zsh)
   '';
 
   meta = kubernetes.meta // {

pkgs/applications/networking/cluster/kubernetes/default.nix

@@ -1,7 +1,14 @@
-{ stdenv, lib, fetchFromGitHub, removeReferencesTo, which, go, go-bindata, makeWrapper, rsync
+{ stdenv
+, lib
+, fetchFromGitHub
+, removeReferencesTo
+, which
+, go
+, makeWrapper
+, rsync
+, installShellFiles
+
 , components ? [
-    "cmd/kubeadm"
-    "cmd/kubectl"
     "cmd/kubelet"
     "cmd/kube-apiserver"
     "cmd/kube-controller-manager"
@@ -11,8 +18,6 @@
   ]
 }:
 
-with lib;
-
 stdenv.mkDerivation rec {
   pname = "kubernetes";
   version = "1.19.4";
@@ -24,9 +29,9 @@ stdenv.mkDerivation rec {
     sha256 = "05gisihrklkzsdsrrmvmqlfwfdx73jbwd5668n5wa5hp432qyvwi";
   };
 
-  nativeBuildInputs = [ removeReferencesTo makeWrapper which go rsync go-bindata ];
+  nativeBuildInputs = [ removeReferencesTo makeWrapper which go rsync installShellFiles ];
 
-  outputs = ["out" "man" "pause"];
+  outputs = [ "out" "man" "pause" ];
 
   postPatch = ''
     # go env breaks the sandbox
@@ -41,7 +46,10 @@ stdenv.mkDerivation rec {
     patchShebangs ./hack
   '';
 
-  WHAT=concatStringsSep " " components;
+  WHAT = lib.concatStringsSep " " ([
+    "cmd/kubeadm"
+    "cmd/kubectl"
+  ] ++ components);
 
   postBuild = ''
     ./hack/update-generated-docs.sh
@@ -49,11 +57,12 @@ stdenv.mkDerivation rec {
   '';
 
   installPhase = ''
-    mkdir -p "$out/bin" "$out/share/bash-completion/completions" "$out/share/zsh/site-functions" "$man/share/man" "$pause/bin"
+    for p in $WHAT; do
+      install -D _output/local/go/bin/''${p##*/} -t $out/bin
+    done
 
-    cp _output/local/go/bin/* "$out/bin/"
-    cp build/pause/pause "$pause/bin/pause"
-    cp -R docs/man/man1 "$man/share/man"
+    install -D build/pause/pause -t $pause/bin
+    installManPage docs/man/man1/*.[1-9]
 
     cp cluster/addons/addon-manager/kube-addons.sh $out/bin/kube-addons
     patchShebangs $out/bin/kube-addons
@@ -61,19 +70,22 @@ stdenv.mkDerivation rec {
 
     cp ${./mk-docker-opts.sh} $out/bin/mk-docker-opts.sh
 
-    $out/bin/kubectl completion bash > $out/share/bash-completion/completions/kubectl
-    $out/bin/kubectl completion zsh > $out/share/zsh/site-functions/_kubectl
+    for tool in kubeadm kubectl; do
+      installShellCompletion --cmd $tool \
+        --bash <($out/bin/$tool completion bash) \
+        --zsh <($out/bin/$tool completion zsh)
+    done
   '';
 
   preFixup = ''
     find $out/bin $pause/bin -type f -exec remove-references-to -t ${go} '{}' +
   '';
 
-  meta = {
+  meta = with lib; {
     description = "Production-Grade Container Scheduling and Management";
     license = licenses.asl20;
     homepage = "https://kubernetes.io";
-    maintainers = with maintainers; [johanot offline saschagrunert];
+    maintainers = with maintainers; [ johanot offline saschagrunert ];
     platforms = platforms.unix;
   };
 }

pkgs/applications/networking/instant-messengers/amsn/default.nix

@@ -1,28 +0,0 @@
-{stdenv, fetchurl, which, tcl, tk, xlibsWrapper, libpng, libjpeg, makeWrapper}:
-
-stdenv.mkDerivation {
-  name = "amsn-0.98.9";
-  src = fetchurl {
-    url = "mirror://sourceforge/amsn/amsn-0.98.9-src.tar.gz";
-    sha256 = "0b8ir7spxnsz8f7kvr9f1k91nsy8cb65q6jv2l55b04fl20x4z7r";
-  };
-
-  configureFlags = [
-    "--with-tcl=${tcl}/lib"
-    "--with-tk=${tk}/lib"
-    "--enable-static"
-  ];
-
-  buildInputs = [which tcl tk xlibsWrapper libpng libjpeg makeWrapper];
-
-  postInstall = ''
-    wrapProgram $out/bin/amsn --prefix PATH : ${tk}/bin
-  '';
-
-  meta = {
-    description = "Instant messaging (MSN Messenger clone)";
-    homepage = "http://amsn-project.net";
-    platforms = stdenv.lib.platforms.linux;
-    license = stdenv.lib.licenses.gpl2;
-  };
-}

pkgs/development/compilers/compcert/default.nix

@@ -1,36 +1,52 @@
-{ stdenv, lib, fetchFromGitHub, fetchpatch, makeWrapper
-, coq, ocamlPackages, coq2html
+{ stdenv, fetchFromGitHub, fetchpatch, makeWrapper
+, coqPackages, ocamlPackages, coq2html
 , tools ? stdenv.cc
+, version ? "3.8"
 }:
 
 let
   ocaml-pkgs      = with ocamlPackages; [ ocaml findlib menhir ];
   ccomp-platform = if stdenv.isDarwin then "x86_64-macosx" else "x86_64-linux";
+  inherit (coqPackages) coq flocq;
+  inherit (stdenv.lib) optional optionalString;
 in
+
+let param = {
+  "3.7" = {
+    sha256 = "1h4zhk9rrqki193nxs9vjvya7nl9yxjcf07hfqb6g77riy1vd2jr";
+    patches = [
+     (fetchpatch {
+        url = "https://github.com/AbsInt/CompCert/commit/0a2db0269809539ccc66f8ec73637c37fbd23580.patch";
+        sha256 = "0n8qrba70x8f422jdvq9ddgsx6avf2dkg892g4ldh3jiiidyhspy";
+      })
+     (fetchpatch {
+        url = "https://github.com/AbsInt/CompCert/commit/5e29f8b5ba9582ecf2a1d0baeaef195873640607.patch";
+        sha256 = "184nfdgxrkci880lkaj5pgnify3plka7xfgqrgv16275sqppc5hc";
+      })
+    ];
+  };
+  "3.8" = {
+    sha256 = "1gzlyxvw64ca12qql3wnq3bidcx9ygsklv9grjma3ib4hvg7vnr7";
+    useExternalFlocq = true;
+  };
+}."${version}"; in
+
 stdenv.mkDerivation rec {
   pname = "compcert";
-  version = "3.7";
+  inherit version;
 
   src = fetchFromGitHub {
     owner = "AbsInt";
     repo = "CompCert";
     rev = "v${version}";
-    sha256 = "1h4zhk9rrqki193nxs9vjvya7nl9yxjcf07hfqb6g77riy1vd2jr";
+    inherit (param) sha256;
   };
 
-  patches = [
-   (fetchpatch {
-      url = "https://github.com/AbsInt/CompCert/commit/0a2db0269809539ccc66f8ec73637c37fbd23580.patch";
-      sha256 = "0n8qrba70x8f422jdvq9ddgsx6avf2dkg892g4ldh3jiiidyhspy";
-    })
-   (fetchpatch {
-      url = "https://github.com/AbsInt/CompCert/commit/5e29f8b5ba9582ecf2a1d0baeaef195873640607.patch";
-      sha256 = "184nfdgxrkci880lkaj5pgnify3plka7xfgqrgv16275sqppc5hc";
-    })
-  ];
+  patches = param.patches or [];
 
   nativeBuildInputs = [ makeWrapper ];
   buildInputs = ocaml-pkgs ++ [ coq coq2html ];
+  propagatedBuildInputs = optional (param.useExternalFlocq or false) flocq;
   enableParallelBuilding = true;
 
   postPatch = ''
@@ -43,6 +59,7 @@ stdenv.mkDerivation rec {
       -prefix $out \
       -coqdevdir $lib/lib/coq/${coq.coq-version}/user-contrib/compcert/ \
       -toolprefix ${tools}/bin/ \
+      ${optionalString (param.useExternalFlocq or false) "-use-external-Flocq"} \
       ${ccomp-platform}
   '';
 
@@ -68,7 +85,7 @@ stdenv.mkDerivation rec {
 
   meta = with stdenv.lib; {
     description = "Formally verified C compiler";
-    homepage    = "http://compcert.inria.fr";
+    homepage    = "https://compcert.org";
     license     = licenses.inria-compcert;
     platforms   = [ "x86_64-linux" "x86_64-darwin" ];
     maintainers = with maintainers; [ thoughtpolice jwiegley vbgl ];

pkgs/development/python-modules/alerta/default.nix

@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "alerta";
-  version = "8.0.0";
+  version = "8.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "49e0862c756d644e9349f5040dd59d135cd871ffeaea5fc288eb3a2e818cf61a";
+    sha256 = "a689b2551655ffeb1fa0af2b652653c9355e4f612a3cb8265fcb53c47f83f7c0";
   };
 
   propagatedBuildInputs = [ six click requests requests-hawk pytz tabulate ];

pkgs/development/python-modules/aniso8601/default.nix

@@ -3,7 +3,7 @@
 
 buildPythonPackage rec {
   pname = "aniso8601";
-  version = "8.0.0";
+  version = "8.1.0";
 
   meta = with stdenv.lib; {
     description = "Parses ISO 8601 strings.";
@@ -17,6 +17,6 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "529dcb1f5f26ee0df6c0a1ee84b7b27197c3c50fc3a6321d66c544689237d072";
+    sha256 = "246bf8d3611527030889e6df970878969d3a2f760ba3eb694fa1fb10e6ce53f9";
   };
 }

pkgs/development/python-modules/azure-batch/default.nix

@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "azure-batch";
-  version = "9.0.0";
+  version = "10.0.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "112d73gxjqng348mcvi36ska6pxyg8qc3qswvhf5x4a0lr86zjj7";
+    sha256 = "83d7a2b0be42ca456ac2b56fa3dc6ce704c130e888d37d924072c1d3718f32d0";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/azure-mgmt-network/default.nix

@@ -10,14 +10,14 @@
 }:
 
 buildPythonPackage rec {
-  version = "16.0.0";
+  version = "17.0.0";
   pname = "azure-mgmt-network";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "6159a8c44590cc58841690c27c7d4acb0cd9ad0a1e5178c1d35e0f48e3c3c0e9";
+    sha256 = "3694f2675e152afccb1588a6cc7bb4b4795d442a4e5d7082cdf1f4e32a779199";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/cocotb/default.nix

@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "cocotb";
-  version = "1.3.2";
+  version = "1.4.0";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
     rev = "v${version}";
-    sha256 = "0akkxcj11543c0jn4zdw4a668lk0xg7pghs8mch3xjk8nn8wfblc";
+    sha256 = "0fv0mg8zh40ffq0q39s195y6hvjrzihpx0i3f7ba5881syw3x7p4";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/dependency-injector/default.nix

@@ -9,11 +9,11 @@ in
 
 buildPythonPackage rec {
   pname = "dependency-injector";
-  version = "4.5.1";
+  version = "4.5.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1d5d42a3547a8a8d3b7aa8f4325e5042231bbc86718c89e123c0c62c103cd9d5";
+    sha256 = "345bfa4185802a712e27903b5612d4748a1e2483c3d5da8d840d8a401aeb75ea";
   };
 
   propagatedBuildInputs = [ six ];

pkgs/development/python-modules/pandas/default.nix

@@ -33,11 +33,11 @@ let
 
 in buildPythonPackage rec {
   pname = "pandas";
-  version = "1.1.4";
+  version = "1.1.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a979d0404b135c63954dea79e6246c45dd45371a88631cdbb4877d844e6de3b6";
+    sha256 = "06vhk75hmzgv1sfbjzgnsw9x10h7y6bd6s6z7d6lfnn7wcgc83zi";
   };
 
   nativeBuildInputs = [ cython ];

pkgs/servers/dns/knot-resolver/default.nix

@@ -17,11 +17,11 @@ lua = luajitPackages;
 
 unwrapped = stdenv.mkDerivation rec {
   pname = "knot-resolver";
-  version = "5.2.0";
+  version = "5.2.1";
 
   src = fetchurl {
     url = "https://secure.nic.cz/files/knot-resolver/${pname}-${version}.tar.xz";
-    sha256 = "8824267ca3331fa06d418c1351b68c648da0af121bcbc84c6e08f5b1e28d9433";
+    sha256 = "aa37b744c400f437acba7a54aebcbdbe722ece743d342cbc39f2dd8087f05826";
   };
 
   outputs = [ "out" "dev" ];
@@ -30,8 +30,8 @@ unwrapped = stdenv.mkDerivation rec {
   postPatch = ''
     patch meson.build <<EOF
     @@ -50,2 +50,2 @@
-    -systemd_work_dir = join_paths(prefix, get_option('localstatedir'), 'lib', 'knot-resolver')
-    -systemd_cache_dir = join_paths(prefix, get_option('localstatedir'), 'cache', 'knot-resolver')
+    -systemd_work_dir = prefix / get_option('localstatedir') / 'lib' / 'knot-resolver'
+    -systemd_cache_dir = prefix / get_option('localstatedir') / 'cache' / 'knot-resolver'
     +systemd_work_dir  = '/var/lib/knot-resolver'
     +systemd_cache_dir = '/var/cache/knot-resolver'
     EOF

pkgs/servers/nosql/cassandra/3.11.nix

@@ -1,6 +1,6 @@
 { callPackage, ... } @ args:
 
 callPackage ./generic.nix (args // {
-  version = "3.11.4";
-  sha256 = "11wr0vcps8w8g2sd8qwp1yp8y873c4q32azc041xpi7zqciqwnax";
+  version = "3.11.9";
+  sha256 = "1ckaacc1z0j72llklrc4587ia6a0pab02bdyac6g3kl6kqvcz40c";
 })

pkgs/top-level/all-packages.nix

@@ -20257,8 +20257,6 @@ in
 
   ams-lv2 = callPackage ../applications/audio/ams-lv2 { };
 
-  amsn = callPackage ../applications/networking/instant-messengers/amsn { };
-
   androidStudioPackages = recurseIntoAttrs
     (callPackage ../applications/editors/android-studio {
       buildFHSUserEnv = buildFHSUserEnvBubblewrap;

pkgs/top-level/coq-packages.nix

@@ -1,4 +1,6 @@
-{ lib, callPackage, newScope, recurseIntoAttrs, ocamlPackages_4_05, ocamlPackages_4_09 }:
+{ lib, callPackage, newScope, recurseIntoAttrs, ocamlPackages_4_05, ocamlPackages_4_09
+, compcert
+}:
 
 let
   mkCoqPackages' = self: coq:
@@ -59,7 +61,9 @@ let
       tlc = callPackage ../development/coq-modules/tlc {};
       Velisarios = callPackage ../development/coq-modules/Velisarios {};
       Verdi = callPackage ../development/coq-modules/Verdi {};
-      VST = callPackage ../development/coq-modules/VST {};
+      VST = callPackage ../development/coq-modules/VST {
+        compcert = compcert.override { version = "3.7"; };
+      };
 
       filterPackages = filterCoqPackages;
     };

pkgs/top-level/perl-packages.nix

@@ -8266,6 +8266,22 @@ let
     };
   };
 
+  FileUtilTempdir = buildPerlPackage {
+    pname = "File-Util-Tempdir";
+    version = "0.034";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/P/PE/PERLANCAR/File-Util-Tempdir-0.034.tar.gz";
+      sha256 = "076wdwbvqsg64wr5np8j6pnmmhs9li64g9mw2h33zbbgbv7f47fi";
+    };
+    buildInputs = [ Perlosnames TestException ];
+    meta = {
+      homepage = "https://metacpan.org/release/File-Util-Tempdir";
+      description = "Cross-platform way to get system-wide & user private temporary directory";
+      license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ];
+      maintainers = [ maintainers.sgo ];
+    };
+  };
+
   FileWhich = buildPerlPackage {
     pname = "File-Which";
     version = "1.23";
@@ -9884,6 +9900,22 @@ let
      };
   };
 
+  HTTPTinyCache = buildPerlPackage {
+    pname = "HTTP-Tiny-Cache";
+    version = "0.002";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/P/PE/PERLANCAR/HTTP-Tiny-Cache-0.002.tar.gz";
+      sha256 = "08c6274x7fxl9r7cw1yiq21wv2mjgxw7db0wv5r80dyw377vfzbk";
+    };
+    propagatedBuildInputs = [ FileUtilTempdir Logger ];
+    meta = {
+      homepage = "https://metacpan.org/release/HTTP-Tiny-Cache";
+      description = "Cache HTTP::Tiny responses";
+      license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ];
+      maintainers = [ maintainers.sgo ];
+    };
+  };
+
   HTTPTinyish = buildPerlPackage {
     pname = "HTTP-Tinyish";
     version = "0.17";
@@ -11531,6 +11563,21 @@ let
     buildInputs = [ PathTiny TestWarn ];
   };
 
+  Logger = buildPerlPackage {
+    pname = "Log-ger";
+    version = "0.037";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/P/PE/PERLANCAR/Log-ger-0.037.tar.gz";
+      sha256 = "0f5078g8lkyw09ijpz7dna5xw6yvpd0m283fdrw3s152xmr43qn2";
+    };
+    meta = {
+      homepage = "https://metacpan.org/release/Log-ger";
+      description = "A lightweight, flexible logging framework";
+      license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ];
+      maintainers = [ maintainers.sgo ];
+    };
+  };
+
   LogHandler = buildPerlModule {
     pname = "Log-Handler";
     version = "0.90";