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5147 commits

Author SHA1 Message Date
Mauricio Collares 9be264795c pynac: import segfault fix 2021-08-22 09:53:12 -03:00
Mauricio Collares b565d30c47 maxima: 5.44.0 -> 5.45.0 2021-08-22 09:53:08 -03:00
Narazaki, Shuji 960ddb6f8f cadical: 1.3.0 -> 1.4.1 2021-08-22 20:46:34 +09:00
R. RyanTM 742cd80071 picard-tools: 2.25.7 -> 2.26.0 2021-08-22 10:47:38 +00:00
Michael Raskin fbfc876625
Merge pull request #135241 from r-ryantm/auto-update/opensmt 
opensmt: 2.0.1 -> 2.1.0
 2021-08-22 10:03:57 +00:00
R. RyanTM 3760bcfd58 opensmt: 2.0.1 -> 2.1.0 2021-08-22 09:30:15 +00:00
R. RyanTM 67c1256ddd stacks: 2.55 -> 2.59 2021-08-22 07:08:39 +00:00
R. RyanTM 0fb51f3bf1 emuflight-configurator: 0.3.6 -> 0.4.0 2021-08-21 22:59:43 +00:00
Sandro b2573f352e
Merge pull request #134578 from smancill/phase-hooks-use-strings 
treewide: ensure pre/post phase hooks are strings
 2021-08-21 14:49:30 +02:00
Sandro Jäckel 026fb18487
ginac: switch to pname + version, cleanup 2021-08-21 11:20:15 +02:00
Sebastián Mancilla 8f94a33b38 treewide: ensure pre/post phase hooks are strings 
Some derivations use lib.optional or lib.optionals when setting pre/post
phase hooks. Ensure the proper lib.optionalString is used.
 2021-08-20 19:08:42 -04:00
Sandro a9f66e941d
Merge pull request #134390 from smancill/colpack-darwin 
colpack: refactor builder and build on darwin
 2021-08-20 23:58:11 +02:00
Tom Repetti 1387ce732d openroad: init at 2.0 2021-08-20 10:16:03 -04:00
Sebastián Mancilla 50062cc371 colpack: refactor builder and build on darwin 
- Use autoreconfHook and set flags with configureFlags.
- Only enable OpenMP on Linux, so it can be built on Darwin.
- Do not install .la file. Other distros also remove them.
- Do not build examples.
- Install example sources into a proper location.
- Fixed license.
 2021-08-19 15:51:23 -04:00
Sandro ac9f41a782
Merge pull request #134393 from smancill/bump-lp-solve 
lp_solve: 5.5.2.5 -> 5.5.2.11
 2021-08-19 21:36:59 +02:00
Sandro 33a0810405
Merge pull request #134720 from cab404/pymole-2.5.0 
pymol: 2.3.0 -> 2.5.0
 2021-08-19 19:51:09 +02:00
Zhenya Vinogradov 6714723bfa sage: fix icon location in the kernel definition 
The icon location is incorrect, `doc` directory exists inside `src`
directory, but not on the top level.
 2021-08-19 12:20:35 +03:00
Vladimir Serov 8992ae0cff
pymol: 2.3.0 -> 2.5.0 2021-08-19 10:16:38 +03:00
davidak f2b906617d
Merge pull request #134361 from Stunkymonkey/why3-phases 
why3: deprecate phases
 2021-08-19 04:06:56 +02:00
Sebastián Mancilla 514c8569aa lp_solve: 5.5.2.5 -> 5.5.2.11 
- Use the generic builder and override build and install phases instead
  of using buildCommand and missing phases and hooks, like fixup.

- Fix build on Darwin by using the proper build script (ccc.osx).

  - Add cctools to build inputs because ccc.osx uses the libtool
    command.

  - The install_name of the library is not set so fix it with
    fixDarwinDylibNames.

- Install headers into the expected location $out/include/lpsolve
  instead of $out/include. This follows what other distro do.
 2021-08-17 23:20:47 -04:00
Ryan Mulligan ad59a67ec0
Merge pull request #134444 from r-ryantm/auto-update/picard-tools 
picard-tools: 2.25.1 -> 2.25.7
 2021-08-17 16:47:31 -07:00
Artturi 8ba3c63144
Merge pull request #133998 from r-ryantm/auto-update/wxmaxima 
wxmaxima: 21.02.0 -> 21.05.2
 2021-08-17 23:00:21 +03:00
Gabriel Ebner 65cafb6030
Merge pull request #134474 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.19.0 -> 3.20.1
 2021-08-17 21:32:08 +02:00
Artturi 4f36420d07
Merge pull request #134045 from r-ryantm/auto-update/minimap2 
minimap2: 2.17 -> 2.22
 2021-08-17 22:22:47 +03:00
Ryan Mulligan 6cae9fd0c5
Merge pull request #134472 from r-ryantm/auto-update/vowpal-wabbit 
vowpal-wabbit: 8.10.0 -> 8.11.0
 2021-08-17 11:18:02 -07:00
R. RyanTM 73b3e147ea openhantek6022: 3.2.3 -> 3.2.4 2021-08-17 10:33:56 -07:00
R. RyanTM cbd7e0dec1 qalculate-gtk: 3.19.0 -> 3.20.1 2021-08-17 16:04:54 +00:00
R. RyanTM 6d139ed34f vowpal-wabbit: 8.10.0 -> 8.11.0 2021-08-17 15:59:33 +00:00
R. RyanTM 1a23a8bb9e picard-tools: 2.25.1 -> 2.25.7 2021-08-17 13:50:42 +00:00
Gabriel Ebner f267d39257
Merge pull request #134394 from r-ryantm/auto-update/elan 
elan: 1.0.6 -> 1.0.7
 2021-08-17 10:03:05 +02:00
R. RyanTM b1868a8296 elan: 1.0.6 -> 1.0.7 2021-08-17 03:53:13 +00:00
Felix Buehler c849ada0c5 why3: deprecate phases 2021-08-16 22:50:19 +02:00
Felix Buehler 8a8a949ffd tlaplusToolbox: deprecate phases 2021-08-16 21:54:44 +02:00
Felix Buehler 8ad1a7859a tlaps: deprecate phases 2021-08-16 21:54:22 +02:00
Ilan Joselevich 9f5b3fafa0 SPAdes: 3.15.2 -> 3.15.3 2021-08-15 11:12:42 +03:00
R. RyanTM 5caebbb040 verilator: 4.202 -> 4.210 2021-08-14 17:01:17 -05:00
R. RyanTM 5693a554e2 minimap2: 2.17 -> 2.22 2021-08-14 15:55:35 +00:00
R. RyanTM 0ba50b681e wxmaxima: 21.02.0 -> 21.05.2 2021-08-14 11:51:36 +00:00
Michael Raskin 1350415b52
Merge pull request #127798 from PhDyellow/r_bump_version 
R: 4.0.4 -> 4.1.0
 2021-08-13 13:41:07 +00:00
Phil Dyer a21caa7f19 Remove unused fetchpatch from inputs 2021-08-13 10:19:31 +10:00
Phil Dyer 7f07184a8e Add Patch for aarch64 2021-08-13 10:16:59 +10:00
Sandro 7d75a19c60
Merge pull request #131463 from angustrau/logisim-evolution 2021-08-12 12:22:42 +02:00
Artturi 8ebdf7ec6b
Merge pull request #133322 from r-ryantm/auto-update/ginac 
ginac: 1.8.0 -> 1.8.1
 2021-08-11 23:01:14 +03:00
Phil Dyer d37edcd3d5 R: 4.1.0 -> 4.1.1 2021-08-11 16:41:53 +10:00
R. RyanTM e36200fc36 ginac: 1.8.0 -> 1.8.1 2021-08-10 07:09:09 +00:00
Artturi 5a587da43c
Merge pull request #133187 from Stunkymonkey/plm-fix 
plm: fix old link & deprecate phases
 2021-08-10 04:39:14 +03:00
Artturi ae50676a71
Merge pull request #133235 from r-ryantm/auto-update/jmol 
jmol: 14.31.46 -> 14.31.49
 2021-08-10 03:36:07 +03:00
R. RyanTM 72a522e795 jmol: 14.31.46 -> 14.31.49 2021-08-09 07:27:37 +00:00
R. RyanTM 323134240a gama: 2.12 -> 2.14 2021-08-09 00:26:53 +00:00
Felix Buehler d62ab96698 plm: fix old link & deprecate phases 2021-08-08 23:53:53 +02:00
Dmitry Kalinkin e51edc1e64
Merge pull request #130903 from veprbl/pr/cwltool 
cwltool: init at 3.1.20210628163208
 2021-08-08 11:15:33 -04:00
Sandro 93ead26f57
Merge pull request #130359 from sheepforce/avogadro2 2021-08-08 13:07:33 +02:00
Sandro fd26f351b5
Merge pull request #131493 from collares/polymake-4.4 
polymake: 3.2.rc4 -> 4.4
 2021-08-08 12:30:59 +02:00
Jörg Thalheim 5ec2eafb18
Merge pull request #125133 from sophrosyne97/fix_vhd2vl 
vhd2vl: fix build error
 2021-08-08 11:12:45 +01:00
Sandro bfd533061e
Merge pull request #132881 from r-ryantm/auto-update/lepton-eda 2021-08-07 12:11:38 +02:00
Artturi e69c8ea78e
Merge pull request #111691 from jbedo/bowtie2 
bowtie2: resolve missing runtime dependencies
 2021-08-07 04:03:47 +03:00
R. RyanTM d06fec649b lepton-eda: 1.9.13-20201211 -> 1.9.16-20210731 2021-08-06 09:59:50 +00:00
Sandro cfdee1710c
Merge pull request #109552 from tesq0/merge-request-lepton-eda 2021-08-05 15:35:14 +02:00
Mikolaj Galkowski 629e1d384d lepton-eda: init at 1.9.13-20201211 2021-08-05 14:18:10 +02:00
Markus Kowalewski d26039d43b
openmolcas: 21.02 -> 21.06 2021-08-05 13:18:28 +02:00
Sandro 04b5e62d8d
Merge pull request #132468 from Stunkymonkey/applications-phases1 2021-08-05 09:37:57 +02:00
Markus Kowalewski 7d3b20253f
ergoscf: init at 3.8 2021-08-04 00:29:52 +02:00
Stig c464dc811b
Merge pull request #132237 from Artturin/perlmagikupdate 
perlPackages.ImageMagick: 7.0.10 -> 7.0.11
 2021-08-03 00:16:14 +02:00
Felix Buehler be219752d2 picard-tools: deprecate phases 2021-08-03 00:04:29 +02:00
Felix Buehler 4b883542fe varscan: deprecate phases 2021-08-03 00:04:16 +02:00
Felix Buehler e3dd43360e eagle7: deprecate phases 2021-08-03 00:03:58 +02:00
Felix Buehler f67a0a37f0 saw-tools: remove phases 2021-08-03 00:03:41 +02:00
Felix Buehler 7b20eb9e37 scilab-bin: remove phases 2021-08-03 00:03:12 +02:00
Felix Buehler 44cb64dba6 quantomatic: deprecate phases 2021-08-03 00:02:58 +02:00
Artturin f173c77476 perlPackages.ImageMagick: rename from perlPackages.PerlMagick 2021-08-02 20:05:00 +03:00
Ben Wolsieffer e8b00e9eeb mavproxy: 1.8.39 -> 1.8.40 2021-07-31 18:40:30 -04:00
Ben Siraphob 2f94991628 treewide: fix redirected URLs 
Using the script in maintainers/scripts/update-redirected-urls.sh
 2021-08-01 00:01:50 +07:00
Ben Siraphob 72d0a639ce
Merge pull request #131755 from r-ryantm/auto-update/libpoly 
libpoly: 0.1.9 -> 0.1.10
 2021-07-31 15:49:23 +07:00
Sandro 1524f36b3e
Merge pull request #131627 from jbedo/mosdepth 
mosdepth: 0.3.1 -> 0.3.2
 2021-07-29 13:56:24 +00:00
Frederik Rietdijk 8dcfe523f7
Merge pull request #131719 from FRidh/python2-to-3 
Python: further migrate packages from 2 to 3
 2021-07-29 10:49:00 +02:00
R. RyanTM 1d4ae0cfb7 libpoly: 0.1.9 -> 0.1.10 2021-07-28 00:31:53 +00:00
Frederik Rietdijk 8f6b07c223 maxima: use strictDeps and python3 2021-07-27 20:37:06 +02:00
github-actions[bot] db6a26db02
Merge master into staging-next 2021-07-27 18:01:01 +00:00
Phillip Seeber 9504a98c32 avogadro2: init at 1.94.0 
avogadro2: code-review suggestions


avogadro2: review comments
 2021-07-27 18:43:15 +02:00
Sandro Jäckel cebfbdff37
mrbayes: 3.2.7 -> 3.2.7a 2021-07-27 14:30:23 +02:00
github-actions[bot] 2692c2e427
Merge master into staging-next 2021-07-27 12:01:20 +00:00
Sandro 28d58fb25f
Merge pull request #131531 from SuperSandro2000/mrbayes 
mrbayes: modernize
 2021-07-27 10:57:14 +00:00
Sandro Jäckel 108ad942fb
mrbayes: modernize 2021-07-27 11:53:51 +02:00
Phil Dyer 9a88197fe7 R: 4.0.4 -> 4.1.0 
Co-authored-by: Mauricio Collares <244239+collares@users.noreply.github.com>
 2021-07-27 12:32:00 +10:00
github-actions[bot] 737604e550
Merge master into staging-next 2021-07-27 00:01:35 +00:00
Justin Bedo d885373469
mosdepth: 0.3.1 -> 0.3.2 2021-07-27 09:52:22 +10:00
Guillaume Girol 455712841c
Merge pull request #130663 from symphorien/bitwuzla 
bitwuzla: init at unstable-2021-07-01
 2021-07-26 19:45:46 +00:00
Frederik Rietdijk 62370fb59a Merge remote-tracking branch 'upstream/master' into staging-next 2021-07-26 09:19:44 +02:00
Ryan Mulligan cec4b2a274
Merge pull request #131319 from r-ryantm/auto-update/jmol 
jmol: 14.31.44 -> 14.31.46
 2021-07-25 19:41:51 -07:00
Mauricio Collares 045d6f35d9 polymake: 3.2.rc4 -> 4.4 2021-07-25 20:12:21 -03:00
Angus Trau 351b7d24e2
logisim: create desktop entry (#131450) 2021-07-25 17:46:34 -04:00
Guillaume Girol 1894e8d945 bitwuzla: init at unstable-2021-07-01 2021-07-25 15:52:25 +02:00
Angus Trau 92cced04c6 logisim-evolution: init at 3.5.0 2021-07-25 19:52:24 +10:00
github-actions[bot] 6a5e4f2c3d
Merge master into staging-next 2021-07-25 06:01:27 +00:00
Ben Siraphob 0f34985134
Merge pull request #122828 from balodja/openmodelica 2021-07-25 09:24:25 +07:00
github-actions[bot] a37fbac53b
Merge master into staging-next 2021-07-25 00:01:35 +00:00
Sandro 224159802c
Merge pull request #131152 from r-ryantm/auto-update/bedops 
bedops: 2.4.39 -> 2.4.40
 2021-07-24 22:53:05 +00:00
github-actions[bot] 859acbc1bc
Merge master into staging-next 2021-07-24 18:01:04 +00:00
Vladimir Korolev 5c8561f11a openmodelica: 1.9.3 -> 1.17.0 with lots of changes 
Co-authored-by: Jaakko Luttinen <jaakko.luttinen@iki.fi>

Most of changes are:
* separate packages for different openmodelica components,
* qt4 -> qt5,
* patches to instruct the OMEdit wrapper with stdenv executables
  location,
* adoption of #89731 and #109595,
* openblas -> blas, lapack according to #83888,
* parallel building,
* getting rid of spurious build phases,
* correct the license,
* cross-compilation,
* forcing compiler to clang++ according to OM build recommendations,
* drop of pangox_compat according to #75909 and #76412,
* better dependencies, and more.
 2021-07-24 20:29:26 +03:00
Daniël de Kok 8cb9eabf96
Merge pull request #131177 from r-ryantm/auto-update/finalfusion-utils 
finalfusion-utils: 0.12.0 -> 0.13.0
 2021-07-24 14:47:49 +02:00
R. RyanTM 4e5b3b49e4 jmol: 14.31.44 -> 14.31.46 2021-07-24 09:22:42 +00:00
Guillaume Girol 0708fe494b cadical: install library 2021-07-23 21:19:27 +02:00
github-actions[bot] cb1426e30a
Merge staging-next into staging 2021-07-23 18:01:46 +00:00
arjix ebabecfd2a
nengo-gui: init at 0.4.8 (#130015) 
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
 2021-07-23 14:06:09 +02:00
R. RyanTM 934002f7a4 finalfusion-utils: 0.12.0 -> 0.13.0 2021-07-23 06:08:46 +00:00
R. RyanTM d943e6aa12 bedops: 2.4.39 -> 2.4.40 2021-07-23 01:02:40 +00:00
github-actions[bot] 2e00ed4420
Merge staging-next into staging 2021-07-22 06:01:44 +00:00
Ben Siraphob a5049e8caa
Merge pull request #130971 from siraben/parallel-coq 
coq: enable parallel building
 2021-07-22 10:00:42 +07:00
Dmitry Kalinkin 3f24366cda
cwltool: init at 3.1.20210628163208 2021-07-21 22:11:17 -04:00
Sandro d06f7e07a6
Merge pull request #130925 from SuperSandro2000/python-aliases 2021-07-22 03:21:11 +02:00
Ben Siraphob 7c1d4d8255 coq: enable parallel building 2021-07-22 02:04:47 +07:00
github-actions[bot] 7a1e77336a
Merge staging-next into staging 2021-07-21 18:01:41 +00:00
Sandro Jäckel b4099137b1
pythonPackages: deprecate ConfigArgParse alias 2021-07-21 13:32:54 +02:00
Sandro aee461ddb4
toil: update homepage 2021-07-21 13:28:37 +02:00
Dmitry Kalinkin 866fe59150
toil: init at 5.4.0 2021-07-20 22:18:08 -04:00
github-actions[bot] 23c6d36ba0
Merge staging-next into staging 2021-07-20 18:01:42 +00:00
Sandro 8472d44b82
Merge pull request #130812 from SuperSandro2000/SuperSandro2000-patch-4 
logisim: cleanup
 2021-07-20 19:48:37 +02:00
Sandro fd1ab319b7
logisim: cleanup 2021-07-20 18:33:48 +02:00
Sandro c401885fe1
Merge pull request #130192 from Stunkymonkey/logisim-phases 
logisim: deprecate phases
 2021-07-20 18:32:40 +02:00
github-actions[bot] 0e13cd9f49
Merge staging-next into staging 2021-07-20 12:02:50 +00:00
Sandro 4a340627aa
Merge pull request #130661 from veprbl/pr/snakemake_6_6_1 2021-07-20 11:05:53 +02:00
Ben Siraphob e8599765f5
Merge pull request #130638 from siraben/par-treewide 
treewide: remove unnecessary enableParallelBuilding when using cmake, meson, qmake
 2021-07-20 12:10:21 +07:00
Ben Siraphob 4ce8c34049 treewide: remove unnecessary enableParallelBuilding when using qmake 2021-07-20 10:32:58 +07:00
github-actions[bot] e86ff5c2b2
Merge staging-next into staging 2021-07-20 00:02:21 +00:00
Guillaume Girol 6554384a70 boolector: 3.2.1 -> 3.2.2 2021-07-19 16:11:01 -07:00
Dmitry Kalinkin 3a79b1fece
snakemake: 6.5.3 -> 6.6.1 2021-07-19 16:22:36 -04:00
Dmitry Kalinkin a93f2af20b
snakemake: add missing optional dependenices 
These are needed to generate reports
 2021-07-19 16:19:27 -04:00
github-actions[bot] c455b1a657
Merge staging-next into staging 2021-07-19 18:01:44 +00:00
Ben Siraphob d53846e29e
Merge pull request #130583 from jvanbruegge/isabelle2021 
Isabelle: 2020 -> 2021
 2021-07-19 20:56:48 +07:00
Millian Poquet c6f34aeaef simgrid: compile tests in parallel 2021-07-19 14:05:17 +02:00
Millian Poquet c4ec6ffb78 simgrid: fix paths in smpicc/smpicxx 2021-07-19 14:04:57 +02:00
Millian Poquet 33f915f241 simgrid: propagate boost 
Since SimGrid include files directly include boost files,
most SimGrid users need boost as well.
 2021-07-19 14:03:50 +02:00
Millian Poquet 2d05c2d535 simgrid: 3.27 -> 3.28 2021-07-19 14:01:30 +02:00
Jan van Brügge e32da890c9
isabelle: Add desktop entry 2021-07-19 12:04:30 +02:00
github-actions[bot] dde34afc63
Merge staging-next into staging 2021-07-19 00:02:18 +00:00
Jan van Brügge 9111bd40b2
isabelle: 2020 -> 2021 2021-07-18 23:51:36 +02:00
Sandro d5bd34ebf2
treewide: convert phases that contain ":" to dont* = true (#130500) 2021-07-18 23:42:48 +02:00
github-actions[bot] 09be4e7750
Merge staging-next into staging 2021-07-18 12:01:50 +00:00
Jörg Thalheim d4b8356ce2 pcalc: 20141224 -> 20181202 2021-07-18 08:40:09 +02:00
github-actions[bot] 08a8809bfe
Merge staging-next into staging 2021-07-18 00:02:06 +00:00
Sandro 24debc24c6
Merge pull request #130194 from Stunkymonkey/fdr-phases 
fdr: deprecate phases
 2021-07-18 00:41:56 +02:00
Felix Buehler 82cb33a0ae treewide: remove meta.version 2021-07-18 00:07:38 +02:00
github-actions[bot] 11332e9137
Merge staging-next into staging 2021-07-17 18:01:28 +00:00
Robert Scott 681821fefe
Merge pull request #129834 from r-ryantm/auto-update/bcftools 
bcftools: 1.11 -> 1.13
 2021-07-17 18:26:47 +01:00
github-actions[bot] 732bd85cf5
Merge staging-next into staging 2021-07-17 12:01:55 +00:00
Guillaume Girol cb7e11dcb3
Merge pull request #130404 from collares/pynac-0.7.29 
pynac: 0.7.27 -> 0.7.29
 2021-07-17 09:08:46 +00:00
(cdep)illabout 299082636c
cedille: set no hydra platforms 2021-07-17 11:17:09 +09:00
(cdep)illabout ff0c051daf
cedille: mark broken 2021-07-17 11:10:26 +09:00
Mauricio Collares 183071d282 pynac: 0.7.27 -> 0.7.29 2021-07-16 19:30:11 -03:00
github-actions[bot] ed4094a728
Merge staging-next into staging 2021-07-16 00:02:18 +00:00
Sandro 9b8e8b2047
Merge pull request #130193 from Stunkymonkey/verifast-phases 
verifast: deprecate phases
 2021-07-15 23:40:17 +02:00
Sandro daa42d5347
Merge pull request #130210 from veprbl/pr/root_6_24_02 2021-07-15 22:52:29 +02:00
Sandro 025cab89d9
Merge pull request #130187 from Stunkymonkey/workcraft-phases 
workcraft: deeprecate phases
 2021-07-15 21:59:16 +02:00
github-actions[bot] 2165de1758
Merge staging-next into staging 2021-07-15 18:02:07 +00:00
FliegendeWurst 5a1b72a6b1 mathematica: 12.3.0 -> 12.3.1 2021-07-15 15:29:33 +02:00
github-actions[bot] 0db5cea36d
Merge staging-next into staging 2021-07-15 06:01:32 +00:00
Vincent Laporte e57571bdb6 gappa: 1.3.5 → 1.4.0 2021-07-15 07:55:52 +02:00
Dmitry Kalinkin 1cbb9c64d1
root,root5: apply nixpkgs-fmt 2021-07-14 16:23:09 -04:00
Dmitry Kalinkin 62ab958fb0
root: 6.24.00 -> 6.24.02 2021-07-14 14:58:15 -04:00
github-actions[bot] 6630d8e9bb
Merge staging-next into staging 2021-07-14 18:01:45 +00:00
Felix Buehler 7ab67cfa4c fdr: deprecate phases 2021-07-14 16:42:23 +02:00
Felix Buehler b6fb4cedaf verifast: deprecate phases 2021-07-14 16:41:30 +02:00
Felix Buehler ac75afe239 logisim: deprecate phases 2021-07-14 16:40:28 +02:00
Felix Buehler cdf9e86ad1 leo3-bin: deprecate phases 2021-07-14 16:38:38 +02:00
Felix Buehler 3680a85bcb workcraft: deeprecate phases 2021-07-14 16:33:41 +02:00
Sandro Jäckel 388a4ef423
treewide: convert all links git.archlinux.org to github.com/archlinux/svntogit-* 2021-07-14 03:35:21 +02:00
Dmitry Kalinkin 43ae777382
Merge pull request #130090 from evils/kicad 
kicad-unstable: update; now requires python
 2021-07-13 14:20:39 -04:00
Evils 0e6d186906 kicad-unstable: needs python 
needed since upstream merge request 796 got merged on 2021-06-01
 2021-07-13 12:47:26 +02:00
Evils 428d2a2f51 kicad-unstable: 2021-05-16 -> 2021-07-12 2021-07-13 12:46:17 +02:00
github-actions[bot] 5779c9a1dd
Merge staging-next into staging 2021-07-12 18:01:40 +00:00
markuskowa cd55326158
Merge pull request #129662 from sheepforce/cp2k 
CP2K: init at 8.1.0
 2021-07-12 19:28:33 +02:00
Ryan Mulligan 3c82ddb28c
Merge pull request #130016 from r-ryantm/auto-update/engauge-digitizer 
engauge-digitizer: 12.1 -> 12.2.2
 2021-07-12 11:08:24 -05:00
R. RyanTM d342554ec5 engauge-digitizer: 12.1 -> 12.2.2 2021-07-12 14:06:35 +00:00
Markus Kowalewski 77be900d67
octopus: cleanup derivation 2021-07-12 14:15:05 +02:00
Markus Kowalewski 0a1167fd0b
octopus: 10.3 -> 10.5 2021-07-12 13:31:28 +02:00
markuskowa 13b3e91794
Merge pull request #128856 from cburstedde/package-petsc-p4est 
petsc: refactor using mpi and p4est
 2021-07-12 11:46:44 +02:00
Sandro 9afe59f2e6
Merge pull request #129938 from eduardosm/diylc 2021-07-11 22:40:33 +02:00
Dmitry Kalinkin 45bed6d99f
snakemake: 6.5.0 -> 6.5.3 2021-07-11 10:40:09 -04:00
Eduardo Sánchez Muñoz 8f66191e32 diylc: 4.17.0 -> 4.18.0 2021-07-11 15:45:23 +02:00
R. RyanTM 7177212409 bcftools: 1.11 -> 1.13 2021-07-10 10:15:10 +00:00
Phillip Seeber 5c4d869ada engauge-digitizer: init at 12.1 
code-review hints


engauge-digitizer: code review suggestions
 2021-07-09 13:27:30 +02:00
Phillip Seeber e503e43a03 cp2k: init at 8.2.0 
cp2k: cleanup/formatting


cp2k: change license


cp2k: remove comment
 2021-07-09 11:27:35 +02:00
Sandro 43b68c4bca dkh: init at 1.2 
Apply suggestions from code review
 2021-07-09 10:40:51 +02:00
Carsten Burstedde 25456656ef
Merge branch 'master' into package-petsc-p4est 2021-07-06 07:19:35 +02:00
Michael Raskin cb098c86b0
Merge pull request #129280 from r-ryantm/auto-update/jmol 
jmol: 14.31.42 -> 14.31.44
 2021-07-06 04:04:19 +00:00
Sandro 90fa755d73
Merge pull request #123692 from collares/eclib-20210503 2021-07-06 01:59:32 +02:00
Carsten Burstedde 705afbd338
Merge branch 'master' into package-petsc-p4est 2021-07-05 19:30:59 +02:00
R. RyanTM 0e2aad0d3f jmol: 14.31.42 -> 14.31.44 2021-07-04 22:17:25 +00:00
github-actions[bot] a6fdcf8d52
Merge master into staging-next 2021-07-04 12:01:06 +00:00
Gabriel Ebner 5fd14f54c7 qalculate-gtk: 3.18.0 -> 3.19.0 2021-07-04 10:41:23 +02:00
Gabriel Ebner 7880aaa756
Merge pull request #124454 from r-ryantm/auto-update/elan 
elan: 1.0.2 -> 1.0.6
 2021-07-04 10:19:58 +02:00
github-actions[bot] 89ee82a6e9
Merge master into staging-next 2021-07-04 06:01:11 +00:00
Sandro 8723bd8119
Merge pull request #129122 from dotlambda/dateutil-alias 2021-07-04 02:53:34 +02:00
Dmitry Kalinkin f0fbfdefe7
Merge branch 'master' into staging-next 2021-07-03 17:51:15 -04:00
Mauricio Collares 30cd543b32 eclib: 20190909 -> 20210625, import sage update patch 2021-07-03 12:55:52 -03:00
R. RyanTM f32e760b64 gwyddion: 2.58 -> 2.59 2021-07-03 11:56:51 +00:00
Robert Schütz 1ec5651913 treewide: use pythonPackages.python-dateutil instead of pythonPackages.dateutil 2021-07-03 13:45:57 +02:00
github-actions[bot] 77a94d88ad
Merge master into staging-next 2021-07-03 06:01:13 +00:00
Sarunas Valaskevicius 5b69b1f3fe tlaToolbox: fix crash on file open dialog 2021-07-02 23:04:39 +01:00
github-actions[bot] 4147e7d4a9
Merge master into staging-next 2021-07-02 18:01:01 +00:00
Gabriel Ebner b38329171a
Merge pull request #128926 from collares/lean-3.31 
lean: 3.30.0 -> 3.31.0
 2021-07-02 19:57:13 +02:00
github-actions[bot] dcd8f68f13
Merge master into staging-next 2021-07-02 00:01:33 +00:00
Mauricio Collares 258e959faf lean: 3.30.0 -> 3.31.0 2021-07-01 20:47:08 -03:00
Michael Raskin 980ebd8f1e
Merge pull request #128831 from collares/sage-sphinx-4 
sage: import sphinx and sympy update patches, update pari 2.13 patch
 2021-07-01 21:42:08 +00:00
Carsten Burstedde 870b2847a4
getdp: align with latest petsc dependency 2021-07-01 22:57:26 +02:00
github-actions[bot] 9d5de3eca1
Merge master into staging-next 2021-07-01 18:01:04 +00:00
Ben Siraphob ee5b85e00e
Merge pull request #128900 from siraben/hol-unix 
hol: expand platforms to unix
 2021-07-01 23:33:15 +07:00
Ben Siraphob e86f5bfa8f hol: expand platforms to unix 2021-07-01 22:19:02 +07:00
Michael Raskin 7ba5c6915d
Merge pull request #128167 from r-ryantm/auto-update/jmol 
jmol: 14.31.41 -> 14.31.42
 2021-07-01 12:56:32 +00:00
Mauricio Collares 17e024867f sage: import sphinx and sympy update patches, update pari 2.13 patch 2021-06-30 20:26:16 -03:00
github-actions[bot] 1a1f2ce95d
Merge master into staging-next 2021-06-30 18:04:09 +00:00
Théo Zimmermann cc84f3906e coq: fix issue introduced in #128603 
This triggerred coq-community/coq-nix-toolbox#42.
 2021-06-30 16:38:39 +02:00
github-actions[bot] 629cea2cd0
Merge master into staging-next 2021-06-30 12:04:22 +00:00
R. RyanTM 360c8128bb gtkwave: 3.3.109 -> 3.3.110 2021-06-29 23:46:07 -07:00
Hunter Jones ef892b0a92 phd2: 2.6.9dev1 -> 2.6.10 2021-06-29 23:42:21 -07:00
R. RyanTM c4e9746406 emuflight-configurator: 0.3.5 -> 0.3.6 2021-06-29 23:28:17 -07:00
github-actions[bot] 7f05df0a91
Merge master into staging-next 2021-06-30 06:04:18 +00:00
Théo Zimmermann d3bb50e7da
Coq: adapt for upcoming 8.14 (#128603) 2021-06-30 04:47:31 +02:00
github-actions[bot] 0fa08dae1b
Merge master into staging-next 2021-06-30 00:08:50 +00:00
Sandro be4382dcb3
Merge pull request #126878 from mtreca/master 2021-06-30 01:55:22 +02:00
github-actions[bot] fc4cc6ca93
Merge master into staging-next 2021-06-29 12:04:29 +00:00
mtreca 66ca618b33 sumo: 1.8.0 -> 1.9.2 2021-06-29 11:24:41 +02:00
Andrew Childs 55dcd99859 root: use pure CoreSymbolication on Darwin 
The current build works by linking against CoreSymbolication in
/System/Library/PrivateFrameworks. This is impure and doesn't work in
newer versions of macOS.

See https://github.com/NixOS/nixpkgs/issues/128576
 2021-06-29 11:00:05 +09:00
github-actions[bot] 265a07c480
Merge staging-next into staging 2021-06-27 12:04:27 +00:00
Vincent Laporte d60534722e why3: use GTK3 2021-06-27 09:03:12 +02:00
Vincent Laporte 773bdf6998 why3: 1.3.3 → 1.4.0 
framac: 22.0 → 23.0-rc1
 2021-06-27 09:03:12 +02:00
github-actions[bot] 1016b5a6ba
Merge staging-next into staging 2021-06-27 00:10:43 +00:00
Hunter Jones 193e721cb2 siril: 0.99.8.1 -> 0.99.10.1 2021-06-26 12:57:56 -05:00
R. RyanTM 517fdc1aea jmol: 14.31.41 -> 14.31.42 2021-06-26 04:00:04 +00:00
github-actions[bot] 947012b992
Merge staging-next into staging 2021-06-26 00:09:11 +00:00
Sandro 323e8cac82
Merge pull request #128069 from Artturin/openhantek 
openhantek6022: 3.1.3 -> 3.2.3
 2021-06-25 15:45:00 +02:00
github-actions[bot] be086cc67b
Merge staging-next into staging 2021-06-25 12:06:08 +00:00
Sandro c6b318fdf9
Merge pull request #128061 from lopsided98/mavproxy-update 
mavproxy: 1.8.37 -> 1.8.39
 2021-06-25 12:11:43 +02:00
Artturin 10968efa69 openhantek6022: 3.1.3 -> 3.2.3 2021-06-25 08:42:23 +03:00
Ben Wolsieffer 6a0c1538fc mavproxy: 1.8.37 -> 1.8.39 2021-06-24 20:22:22 -04:00
Sandro e7812f46fe
Merge pull request #128025 from Ma27/bump-stellarium 
stellarium: 0.21.0 -> 0.21.1
 2021-06-24 23:25:35 +02:00
Sandro 1c8bc6c2f1
Merge pull request #127829 from veprbl/pr/snakemake_6_5_0 2021-06-24 22:46:26 +02:00
Maximilian Bosch ea56e08d62
stellarium: 0.21.0 -> 0.21.1 
ChangeLog: https://github.com/Stellarium/stellarium/releases/tag/v0.21.1
 2021-06-24 18:28:40 +02:00
Dmitry Kalinkin e3678ae8a6
snakemake: 6.0.5 -> 6.5.0 2021-06-24 11:36:26 -04:00
Sandro 6ff52436cf
Merge pull request #127910 from dotlambda/scipy_1_4-drop 2021-06-24 11:43:37 +02:00
Michael Raskin 8481a131ef
Merge pull request #127893 from r-ryantm/auto-update/eprover 
eprover: 2.5 -> 2.6
 2021-06-24 07:42:47 +00:00
github-actions[bot] 1f528e6ac6
Merge staging-next into staging 2021-06-24 00:06:31 +00:00
Anderson Torres 65db0350fe
Merge pull request #127905 from AndersonTorres/new-4ti2 
4ti2: init at 1.6.9
 2021-06-23 21:01:05 -03:00
AndersonTorres 68dd7bca1b 4ti2: add myself to maintainers 2021-06-23 20:23:30 -03:00
github-actions[bot] bcc720d9c5
Merge staging-next into staging 2021-06-23 18:04:33 +00:00
Robert Schütz cc2924ee9a nanovna-saver: don't double-wrap 2021-06-23 18:39:00 +02:00
Robert Schütz 8df3adc8f8 nanovna-saver: use packageOverrides 2021-06-23 18:34:36 +02:00
sternenseemann ba01fb866a glsurf: use ocamlPackages_4_05 
Update to somewhat newer OCaml, so we can hopefully retire older sets in
the future.
 2021-06-23 14:52:32 +00:00
Sandro ac6b100b2e
Merge pull request #127524 from beezow/master 2021-06-23 15:44:04 +02:00
AndersonTorres 4b0789d7c5 4ti2: init at 1.6.9 2021-06-23 10:35:00 -03:00