Commit graph

34270 commits

Author SHA1 Message Date
Michael Raskin 370d94c243 Merge pull request #21758 from dtzWill/update/elfutils
elfutils: 0.165 -> 0.168
2017-01-09 09:26:28 +00:00
Jörg Thalheim bcf8d8c6ef Merge pull request #21634 from peterhoeg/f/qscint
qscintilla: 2.9 -> 2.9.4 and support for qt5
2017-01-08 23:43:24 +01:00
Jörg Thalheim 90ea0c000c
octave: 4.0.3 -> 4.2.0 2017-01-08 23:40:40 +01:00
Will Dietz 2afcf34281 elfutils: Update website and URL to new sourceware location. 2017-01-08 16:30:05 -06:00
Will Dietz 157b216852 elfutils: 0.165 -> 0.168 2017-01-08 16:07:43 -06:00
Peter Simons 6d58ab2edf jailbreak-cabal: ghc-HEAD needs version 1.3.2 due to API changes in Cabal
https://github.com/peti/jailbreak-cabal/issues/12
2017-01-08 21:11:18 +01:00
Peter Simons dd0d71727a git-annex: fix build 2017-01-08 21:11:18 +01:00
Peter Simons 667c4e4925 hackage-packages.nix: automatic Haskell package set update
This update was generated by hackage2nix v2.0.4-7-g48fad11 from Hackage revision
47c259fc33.
2017-01-08 21:11:17 +01:00
Peter Simons 9729a8d015 haskell-esqueleto: keep version 2.4.x around so that we can still build git-annex 2017-01-08 21:11:17 +01:00
Sebastian Hagen d042abef26 zlib: Fix zlib.net URL. (#21753)
Look for primary source file below
  http://zlib.net/fossils/ as opposed to
  http://zlib.net/
. zlib-1.2.8.tar.gz is still available at the former location, and will likely
remain there. In addition, it's important that the first URL work since zlib
is in the bootstrap path, and 16.09 (at least) bootstrap doesn't try to fetch
from later ones.
2017-01-08 18:09:57 +01:00
Moritz Ulrich 7435fefd26
rustc: Disable fragile tcp tests on Darwin
This is an alternative implementation of
https://github.com/NixOS/nixpkgs/pull/21741/files
2017-01-08 16:55:36 +01:00
Graham Christensen 07e425b9b9 Merge pull request #21749 from sifmelcara/update/crystal
crystal: 0.20.3 -> 0.20.4
2017-01-08 08:49:59 -05:00
Domen Kožar 8940c68c09
hydra: 2016-04-15 -> 2016-12-09
Fixes #19396 #21424
2017-01-08 14:40:12 +01:00
Jay Mundrawala 3dc8b5d904 rustUnstableBin.rustc: Run patchelf on bin/rustdoc (#21746)
Cargo seems to run rustdoc and produces an annoying error when
it tries to run.
2017-01-08 10:53:44 +01:00
mingchuan e8c9a4b3ba crystal: 0.20.3 -> 0.20.4 2017-01-08 14:31:59 +08:00
Daiderd Jordan 826d6aa6cd Merge pull request #21382 from johbo/darwin-pygtk-quartz-backend
Darwin gtk2/pygtk quartz backend
2017-01-08 00:18:33 +01:00
Domen Kožar 372e04f189
libpqxx: use gnused_422 2017-01-07 20:16:17 +01:00
Matthew Bauer ea053cad7a gtk-mac-integration: init at 2.0.8 2017-01-07 19:21:42 +01:00
Johannes Bornhold 0f67005c4a cairo: Add ApplicationServices as propagatedBuildInput
Noticed that it caused depending packages to fail, like librsvg, imagemagiv, graphviz.
2017-01-07 19:21:42 +01:00
schneefux 96504cd75c pythonPackages.discordpy: 0.15.1 -> 0.16 2017-01-07 20:02:05 +02:00
Anmol Sethi 2ef6af7afd libtermkey: from 0.18 to 0.19 2017-01-07 19:59:45 +02:00
Johannes Bornhold 8f7adffe4d pygtk: Add flag -ObjC for darwin
Had to add this so that it was able to parse the headers from the frameworks.
2017-01-07 17:35:09 +01:00
Johannes Bornhold 5a572f8018 gtk2: Use quartz backend on darwin 2017-01-07 17:35:09 +01:00
Johannes Bornhold 9f31633a50 librsvg: Add framework ApplicationServices for darwin 2017-01-07 17:31:10 +01:00
Johannes Bornhold 354c91df2e pango: Add darwin frameworks for fond rendering 2017-01-07 17:31:10 +01:00
Johannes Bornhold bbdca635cf cairo: Add CoreText for darwin
This helps so that fonts are properly rendered in gtk when used with the backend
"quartz".
2017-01-07 17:31:10 +01:00
Shea Levy 71fc7f9748 ghc-head: Fixes for new base and Cabal 2017-01-07 10:28:48 -05:00
Domen Kožar 133ba5f08a
GHC: 8.0.2-rc2 -> 8.0.2 2017-01-07 16:17:54 +01:00
Gabriel Ebner da9e9061f1 haskellPackages.hledger-diff: 0.2.0.6 -> 0.2.0.7
Currently hledger-diff is broken because of the hledger-lib version
bump.
2017-01-07 15:16:36 +01:00
Graham Christensen 428927ffa6
openjpeg2: patch for multiple CVEs
-  Floating Point Exception (aka FPE or divide by zero) in
    opj_pi_next_cprl function in openjp2/pi.c:523 in OpenJPEG
    2.1.2. (CVE-2016-9112)

 -  There is a NULL Pointer Access in function imagetopnm of
    convert.c:1943(jp2) of OpenJPEG 2.1.2. image->comps[compno].data is
    not assigned a value after initialization(NULL). Impact is Denial of
    Service. (CVE-2016-9114)

 -  NULL Pointer Access in function imagetopnm of convert.c:2226(jp2) in
    OpenJPEG 2.1.2. Impact is Denial of Service. Someone must open a
    crafted j2k file. (CVE-2016-9116)

 -  Heap Buffer Overflow (WRITE of size 4) in function pnmtoimage of
    convert.c:1719 in OpenJPEG 2.1.2. (CVE-2016-9118)
2017-01-07 06:51:31 -05:00
Peter Simons c5f8c7fe36 Merge pull request #21722 from mimadrid/fix/r-modules
Fix a lot of rPackages
2017-01-07 12:19:42 +01:00
Shea Levy 845dd121f8 ghc-head: Put ./boot into commonPreConfigure 2017-01-06 22:10:29 -05:00
Shea Levy c5c7911ac2 libuv: disable getaddrinfo tests.
Seem to require network access, at least on darwin
2017-01-06 21:09:49 -05:00
Franz Pletz 887e703d42 Merge pull request #21640 from mguentner/cpp_ipfs_api_update
cpp-ipfs-api: 2016-11-09 -> 2017-01-04
2017-01-07 00:44:01 +01:00
Thomas Tuegel 8633dab72a Merge pull request #21650 from dbalan/ldns-1.7.0
ldns 1.6.17 -> 1.7.0
2017-01-06 14:46:18 -06:00
Vladimír Čunát 1e253d54f5
libpng12: security 1.2.56 -> 1.2.57
CVE-2016-10087
2017-01-06 21:15:46 +01:00
mimadrid 8954412fcc
r-modules: fix snpStats package 2017-01-06 21:07:25 +01:00
mimadrid b5a0925663
r-modules: fix VariantAnnotation package 2017-01-06 21:07:25 +01:00
mimadrid 6540b6507d
r-modules: fix rtracklayer package 2017-01-06 21:07:25 +01:00
mimadrid baf65d5000
r-modules: fix Rsubread package 2017-01-06 21:07:25 +01:00
mimadrid 9ebab25442
r-modules: fix gmapR package 2017-01-06 21:07:25 +01:00
mimadrid 286e86f3a5
r-modules: fix oligo package 2017-01-06 21:07:25 +01:00
mimadrid afd1a4c933
r-modules: fix affyio package 2017-01-06 21:07:25 +01:00
mimadrid 4c0c3c7493
r-modules: fix BitSeq package 2017-01-06 21:07:24 +01:00
mimadrid 272b447ea7
r-modules: fix bamsignals package 2017-01-06 21:07:24 +01:00
mimadrid c5e4754ca7
r-modules: fix affyPLM package 2017-01-06 21:07:24 +01:00
mimadrid 1d7fd8f3c4
r-modules: fix xml2 package 2017-01-06 21:07:24 +01:00
mimadrid 5b813c2ab0
r-modules: fix XBRL package 2017-01-06 21:07:24 +01:00
mimadrid 512be9e14a
r-modules: fix WhopGenome package 2017-01-06 21:07:24 +01:00
mimadrid f9d84f8b65
r-modules: fix tkrplot package 2017-01-06 21:07:24 +01:00