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3439 commits

Author SHA1 Message Date
Mario Rodas 3b6c399fc3
Merge pull request #86720 from r-ryantm/auto-update/picard-tools 
picard-tools: 2.22.2 -> 2.22.4
 2020-05-04 06:01:31 -05:00
R. RyanTM 0a115f8087 cryptominisat: 5.6.8 -> 5.7.0 2020-05-04 01:41:26 -07:00
R. RyanTM 877b1cdad7 picard-tools: 2.22.2 -> 2.22.4 2020-05-04 04:07:44 +00:00
Mario Rodas 3253c03d2e
lean: 3.9.0 -> 3.10.0 2020-05-02 04:20:00 -05:00
Benjamin Hipple 6b21541772
Merge pull request #86101 from dkudriavtsev/magic-vlsi 
magic-vlsi: init at 8.3.5
 2020-05-02 13:51:41 -04:00
R. RyanTM a930faab93 mxnet: 1.4.1 -> 1.6.0 2020-05-02 10:17:38 +02:00
R. RyanTM d0afae4298 dcm2niix: 1.0.20190902 -> 1.0.20200331 2020-05-02 10:16:22 +02:00
Wulfsta 5dbc4f7fda elmerfem: init at release-8.4 2020-05-01 18:35:57 -07:00
Timo Kaufmann 7866440f12
Merge pull request #86274 from samlich/sage-matrix-double-dense 
sage: fix doctest matrix_double_dense is_unitary
 2020-05-01 22:12:10 +00:00
Peter Simons 205e4dffd5
Merge pull request #86081 from jabranham/update-r 
R: 3.6.3 --> 4.0.0 & update packages
 2020-05-01 20:25:14 +02:00
samlich c0bd938e5c
sage: fix doctest matrix_double_dense is_unitary 2020-05-01 16:04:23 +00:00
R. RyanTM 7333b8cd6d eagle: 9.6.0 -> 9.6.1 2020-05-01 09:09:10 +02:00
Dmitry Kalinkin babf5477f5
Merge pull request #86251 from veprbl/pr/sherpa_2_2_9 
sherpa: 2.2.8 -> 2.2.9
 2020-04-29 19:10:43 -04:00
Jan Tojnar 2b5e2ffe0a
Merge pull request #86165 from jtojnar/libusb-compat-rename 2020-04-29 08:26:08 +02:00
Dmitry Kalinkin ae0685129b
sherpa: 2.2.8 -> 2.2.9 2020-04-28 16:46:02 -04:00
evils e257a92472
foldingathome: 7.5.1 -> 7.6.9 (#86171) 2020-04-28 17:20:43 +00:00
Daniël de Kok 3ba5bc7130 fasttext: 0.9.1 -> 0.9.2 
Changelog:

https://github.com/facebookresearch/fastText/releases/tag/v0.9.2
 2020-04-28 12:14:54 +02:00
Jan Tojnar e89e2edc73
libusb-compat-0_1: rename from libusb 2020-04-28 05:33:41 +02:00
Dmitry Kudriavtsev 69f54c1e19 magic-vlsi: init at 8.3.5 2020-04-27 00:13:59 -07:00
Alex Branham 8ce6552d64
R: 3.6.3 -> 4.0.0 2020-04-26 17:06:07 -04:00
Evils b80bd001e2
kicad-unstable: 2020-02-10 -> 2020-04-25 
cc #82634
 2020-04-26 13:38:37 -04:00
Evils 75963b9160
kicad: update.sh: set -e 
and some more suggestions from veprbl

warn if an empty item gets through anyway

and use UTC time

cc #82634
 2020-04-26 13:38:13 -04:00
Renato Garcia 22133c6bf3
snakemake: 5.13.0 -> 5.15.0 (#85913) 2020-04-25 09:19:54 -04:00
Konrad Borowski f527f9db3a snakemake: update homepage link to use HTTPS 2020-04-24 19:44:59 -07:00
Konrad Borowski 40dd2c27c6 rink: update homepage link to use HTTPS 2020-04-24 19:44:59 -07:00
Ben Wolsieffer bc93f123ea mavproxy: 1.8.18 -> 1.8.19 2020-04-24 18:03:57 -07:00
Lassulus d0b1de5491
Merge pull request #70401 from bzizou/quast 
Quast: init at 5.0.2
 2020-04-24 20:26:04 +02:00
Bruno Bzeznik eb51b462aa Quast: init at 5.0.2 2020-04-24 10:11:54 +02:00
Pavol Rusnak 461a252bee
verifast: change license to MIT 
It seems verifast was relicensed to MIT in 2016:
b3c1bce76a

As this was the only package using lib.licenses.msrla I dropped it.
 2020-04-23 09:59:33 +00:00
worldofpeace b4d5dd861b
Merge pull request #84673 from mmilata/qt5-mkDerivation-stdenv 
Use qt5's mkDerivation in packages that otherwise crash
 2020-04-22 13:39:46 -04:00
Martin Milata 7d1c2c05c5 caneda: use qt5's mkDerivation 2020-04-22 15:21:49 +02:00
Frederik Rietdijk ec21df329a
Merge pull request #85636 from matthewbauer/blas-lapack-fix-fallout-from-83888 
BLAS/LAPACK fix fallout from #83888
 2020-04-21 19:59:16 +02:00
Justin Bedo d8d6ecc418 mosdepth: 0.2.6 -> 0.2.9 2020-04-21 19:42:05 +02:00
Maximilian Bosch 68684b6376
stellarium: 0.20.0 -> 0.20.1 
https://github.com/Stellarium/stellarium/releases/tag/v0.20.1
 2020-04-21 18:05:15 +02:00
Matthew Bauer ff2f2644f8 blas,lapack: use isILP64 instead of is64bit 
This is a better name since we have multiple 64-bit things that could
be referred to.

LP64  : integer=32, long=64, pointer=64
ILP64 : integer=64, long=64, pointer=64
 2020-04-20 16:02:43 -05:00
markuskowa d9af81af16
Merge pull request #85006 from r-ryantm/auto-update/verilator 
verilator: 4.030 -> 4.032
 2020-04-20 16:51:31 +02:00
Benjamin Hipple e4db75f46d
Merge pull request #84535 from bcdarwin/update-beluga 
beluga: 20180403 -> unstable-2020-03-11
 2020-04-19 22:53:50 -04:00
Ben Darwin ad7b7367b6 beluga: 20180403 -> unstable-2020-03-11 2020-04-19 21:54:06 -04:00
Mario Rodas f37c9226fc
lean: 3.8.0 -> 3.9.0 2020-04-18 04:20:00 -05:00
Matthew Bauer 97fc083fd4 giac: broken on 64-bit blas 2020-04-17 16:24:31 -05:00
Matthew Bauer 1c8aba8334 treewide: use blas and lapack 
This makes packages use lapack and blas, which can wrap different
BLAS/LAPACK implementations.

treewide: cleanup from blas/lapack changes

A few issues in the original treewide:

- can’t assume blas64 is a bool
- unused commented code
 2020-04-17 16:24:09 -05:00
worldofpeace 433ea74af1 nasc: fix build 2020-04-15 17:19:47 -04:00
AndersonTorres 3b91c3de8f gp2c: 0.0.11pl2 -> 0.0.11pl3 2020-04-15 00:45:28 -03:00
Benjamin Hipple 17a1bf5dbd
Merge pull request #85069 from r-ryantm/auto-update/ginac 
ginac: 1.7.8 -> 1.7.9
 2020-04-12 11:18:43 -04:00
R. RyanTM 9b5aad0644 ginac: 1.7.8 -> 1.7.9 2020-04-12 12:04:38 +00:00
R. RyanTM 3fcbc7545c verilator: 4.030 -> 4.032 2020-04-11 15:46:52 +00:00
Michael Reilly 84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
Mario Rodas 8e537ad391
lean: 3.7.2 -> 3.8.0 2020-04-09 10:40:00 -05:00
Matt Huszagh fc66192b37 fparser: init at 4.5.1 2020-04-09 11:28:21 -07:00
Jonathan Ringer 3238302827 libpoly: fix src 2020-04-09 11:22:53 -07:00