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31 commits

Author SHA1 Message Date
Tikhon Jelvis 70cd2cb336 r-modules: update cran and bioc packages 
The last snapshot was 4 months ago (2020-08-19). I also found that I needed newer definitions when I was trying to fix the R arrow package.

This update required a couple of manual changes:

  1. Removing a few deleted packages from default.nix
  2. Renaming the "assert" package to "r_assert" in generate-r-packages.R because "assert" is a keyword in Nix
 2021-01-02 15:03:06 -08:00
Justin Bedo 6bec22ee40
r-modules: bioc and cran update 2020-08-20 16:46:22 +10:00
Alex Branham cb1a13ad98
R: Update CRAN and bioconductor packages 2020-04-26 17:16:34 -04:00
Alex Branham f5afc20d06
R: Update CRAN and bioconductor packages 2020-04-08 10:01:19 -04:00
Alex Branham e206c37550
R: Update CRAN and bioconductor packages 2020-01-23 21:22:55 -05:00
Alex Branham b9a558aaa4 R: Update CRAN and bioconductor packages 
Closes https://github.com/NixOS/nixpkgs/pull/75010.
 2019-12-16 18:56:49 +01:00
Alex Branham eab786451f
R: Update CRAN and bioconductor packages 2019-08-06 08:49:39 -05:00
Alex Branham 46bca1d643
R: Update CRAN and bioconductor packages 2019-07-02 15:48:06 -05:00
Alex Branham 0a80d3dc82 R: update CRAN and Bioconductor package sets 
Closes https://github.com/NixOS/nixpkgs/pull/59186.
 2019-04-11 20:37:18 +02:00
Alex Branham 8dcba2b842 R: update CRAN and Bioconductor package sets 
Closes https://github.com/NixOS/nixpkgs/pull/57423.
 2019-03-14 19:50:37 +01:00
Alex Branham ec03ed450c update R package set 
Closes https://github.com/NixOS/nixpkgs/pull/55462.
 2019-02-10 11:16:19 +01:00
Alex Branham 48541ab6b9 R: update CRAN and BIOC package sets 
Closes https://github.com/NixOS/nixpkgs/pull/53414.
 2019-01-08 09:34:37 +01:00
Tom McLaughlin cac5c9401e R: update CRAN and BIOC package sets 
Closes https://github.com/NixOS/nixpkgs/pull/49430.
 2018-11-02 17:50:18 +01:00
Peter Simons 03476783a5 R: fix evaluation errors 2018-07-07 12:10:46 +02:00
Peter Simons d984656a2a R: update package set 
The CRAN snapshot is at "2018-07-03". Bioc is now at 3.8.
 2018-07-07 12:10:46 +02:00
Peter Simons 94295e3cee R: update CRAN and BIOC package sets 2018-04-24 09:19:38 +02:00
Peter Simons 52dce0fb38 R: update the CRAN and BIOC package sets 2018-03-15 19:39:55 +01:00
Justin Bedo cfc07bcf0e
bioconductor: 3.4 -> 3.6 2018-02-21 09:58:17 +11:00
Peter Simons aa9bebf261 R: update package set 2017-08-31 21:59:06 +02:00
Peter Simons b1ebe7a72c r-modules: update package set 2017-07-02 09:51:42 +02:00
Peter Simons 430cbcfd2b R: update CRAN and BIOC package sets 2017-04-24 15:39:08 +02:00
Justin Bedo 4bb8727284
R: 3.2.4 -> 3.3.2 2017-02-24 15:22:12 +11:00
Jeffrey David Johnson 2ceec79ad5 work on fixing up bioconductor packages 2016-03-31 16:16:34 -07:00
Jeffrey David Johnson 66bcbfb93d r-modules: update CRAN, add Bioconductor data pkgs 2016-03-22 22:50:54 -07:00
Nikolay Amiantov bd4297dc4d r-modules: regenerate CRAN, BIOC and IRKernel 2015-11-25 11:39:28 +01:00
Karn Kallio 94629aa57d R: regenerate CRAN and BIOC packages 2015-10-04 20:06:49 +02:00
Peter Simons 36fc26c0fc R: regenerate CRAN and BIOC packages 2015-08-06 20:13:50 +02:00
Michel Kuhlmann 18cff91fb7 R: regenerate CRAN and BIOC packages 
Closes https://github.com/NixOS/nixpkgs/pull/9037.
 2015-08-06 20:13:49 +02:00
Michel Kuhlmann bb2b683e63 R: regenerate CRAN and BIOC packages 2015-07-09 14:52:17 +02:00
Peter Simons bb42c215e2 R: improve support for CRAN and Bioconductor package sets 
- Update the instructions for re-generating each of the package set files.
 - Provide test-evaluation.nix expression to verify that the package sets evaluates.
 - Update list of known broken packages.
 2015-06-17 23:19:56 +02:00
Jeffrey David Johnson 93a742fd28 R: add support for Bioconductor packages 2015-06-17 23:19:56 +02:00