Commit graph

3076 commits

Author SHA1 Message Date
Niklas Hambüchen edbe2d8145 R: Add static argument.
R's autoconf does not use the normal configure flags for that.
2019-10-30 11:44:02 +01:00
Ben Darwin ddc2955ad9 EZminc: 2017-08-29 -> 2019-07-25; mark unbroken 2019-10-26 09:55:30 -07:00
Alexey Shmalko 140d402cb5
Merge pull request #71991 from iimog/dcmtk
DCMTK: init at 3.6.4
2019-10-26 15:15:50 +03:00
Markus Ankenbrand 905245b32c dcmtk: init at 3.6.4 2019-10-26 13:02:50 +02:00
Vincent Laporte a8892b0d76
coq_8_10: 8.10.0 → 8.10.1 2019-10-25 07:58:47 +00:00
Vincent Laporte d56582eb2b coq_8_10: enable CoqIDE 2019-10-25 07:58:02 +00:00
scalavision 535a7006ea truvari: init at 1.3.2 (#70877)
pythonPackages.pyvcf: init at 0.6.8
2019-10-24 17:06:42 -04:00
R. RyanTM c6af1f6e03 verilator: 4.018 -> 4.020
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2019-10-24 14:02:00 -05:00
R. RyanTM c300055e11 ott: 0.28 -> 0.29
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2019-10-23 11:44:13 -07:00
R. RyanTM b8acb48b24 picard-tools: 2.20.8 -> 2.21.1 (#71748)
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2019-10-23 09:34:40 +02:00
R. RyanTM a9551de99a dcm2niix: 1.0.20190410 -> 1.0.20190902
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2019-10-22 16:31:19 -07:00
Timo Kaufmann ed145e8f22
Merge pull request #71694 from r-ryantm/auto-update/nauty
nauty: 26r11 -> 26r12
2019-10-22 23:33:48 +02:00
R. RyanTM d93659ffa0 nauty: 26r11 -> 26r12
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2019-10-22 10:14:36 -07:00
R. RyanTM dbab6b7994 jmol: 14.29.53 -> 14.29.54
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2019-10-22 10:06:52 +02:00
Mario Rodas e8e1f42499
Merge pull request #71590 from r-ryantm/auto-update/ginac
ginac: 1.7.7 -> 1.7.8
2019-10-21 20:21:31 -05:00
R. RyanTM bf30d5d6f6 ginac: 1.7.7 -> 1.7.8
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2019-10-21 15:21:33 -07:00
Michael Raskin a35022aa80
Merge pull request #71566 from r-ryantm/auto-update/golly
golly: 3.2 -> 3.3
2019-10-21 19:41:50 +00:00
R. RyanTM b73b9399ba golly: 3.2 -> 3.3
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2019-10-21 11:24:52 -07:00
Renaud 410d794f05
Merge pull request #71073 from nyanloutre/betaflight_configurator_10_6_0
betaflight-configurator: 10.5.1 -> 10.6.0
2019-10-20 20:01:00 +02:00
Ben Wolsieffer 8d04355d87 qgroundcontrol: 3.3.0 -> 3.5.5, fix build (#71308)
* qgroundcontrol: 3.3.0 -> 3.5.4, fix build

* qgroundcontrol: 3.5.4 -> 3.5.5
2019-10-20 19:27:23 +02:00
Emily fecfbe18bd symbiyosys: 2019.08.13 -> 2019.10.11 2019-10-19 12:26:49 -05:00
Daniel Frank b4136a8f5b kicad: 5.1.2 -> 5.1.4, fix ngspice, mark broken on aarch64 (#69584) 2019-10-16 02:02:49 -04:00
Vincent Laporte b4db381443 coq_8_10: 8.10+β3 → 8.10.0
coqPackages.coq-elpi: master → 1.1.0
2019-10-16 02:43:46 +00:00
Vincent Laporte 0cc70b5697 coq: do not build CoqIDE for Coq 8.10
GTK3 at version 3.24.11 has broken pkg-config files
2019-10-16 02:43:46 +00:00
Vincent Laporte 1292f49a37 coq_8_10: do not take “camlp5” as input 2019-10-16 02:43:46 +00:00
Vincent Laporte 325f89ef19 coq_8_10: fix CoqIDE on darwin 2019-10-16 02:43:46 +00:00
worldofpeace 4bcef38f24
Merge pull request #63827 from acairncross/fix-monosat
monosat: Fix Linux build
2019-10-15 20:55:28 +00:00
Aiken Cairncross 15dbd8de7c monosat: 60528a3 -> 1.8.0
This fixes the broken Linux build by only building the dynamic library/
executable (an option that was only added in the latest tagged version).
2019-10-15 16:52:25 -04:00
Aiken Cairncross b4da391ade monosat: Add self as maintainer 2019-10-15 12:20:55 +01:00
Millian Poquet 5b9cbeb75c simgrid: 3.23 -> 3.24 2019-10-14 16:08:43 +02:00
Marco Maggesi 24d0bd37b5
Merge branch 'master' into rename-z77z-into-maggesi 2019-10-13 18:06:23 +02:00
Renaud e6f99fa3b1
Merge pull request #69961 from r-ryantm/auto-update/star
star: 2.7.1a -> 2.7.2b
2019-10-13 17:10:23 +02:00
nyanloutre d849c213ba
betaflight-configurator: 10.5.1 -> 10.6.0 2019-10-13 11:58:00 +02:00
Renaud 94500c93dc
Merge pull request #69515 from r-ryantm/auto-update/eagle
eagle: 9.4.2 -> 9.5.0
2019-10-12 15:09:07 +02:00
Renaud a12f3ebee7
Merge pull request #69488 from r-ryantm/auto-update/clp
clp: 1.17.2 -> 1.17.3
2019-10-12 14:15:31 +02:00
scalavision 3d860972ee delly: init at 0.8.1 (#70871) 2019-10-10 22:08:45 -04:00
worldofpeace dfe338e464
Merge pull request #70890 from worldofpeace/pantheon-no-lts-vala
pantheon: use latest vala
2019-10-10 15:18:38 +00:00
Marek Mahut 19610dce34
Merge pull request #70790 from r-ryantm/auto-update/stellarium
stellarium: 0.19.1 -> 0.19.2
2019-10-10 11:21:55 +02:00
worldofpeace bdb851ee2d pantheon: use latest vala
elementary OS's ecosystem is curated around Ubuntu's LTS releases.
This means the development platform for their curated applications
always includes a LTS version of vala (in 18.04 it's 0.40).
Because of how vala development works it suspect some of these
applications to have serious issues if complied with the latest vala.
However in the past year or so, for Pantheon at least, I don't think
their applications will have much issues with latest vala, and if there
is I don't think they'd be difficult to fix. In this single regard they've
become more responsive since their preferred language is vala.

As for the curated applications I have less of this confidence in.
So I'd have to be accept less applications, but that's something
I'm willing to compromise on. And this is easily reversible or
could be done on a per-application basis. And nix already makes
this trivial.
2019-10-09 22:47:37 -04:00
Robin Gloster d6d4a6b456
Merge pull request #70845 from BenBals/master
Geogebra: 5.0.535 -> 5.0.560
2019-10-09 17:36:35 +02:00
Luz ec13398cdf librepcb: 0.1.0 -> 0.1.2 (#70538)
* Update to new source

* Fix message 'xcb plugin not found'
2019-10-09 14:59:48 +02:00
Ben Justus Bals 911d5d59ec
Geogebra: 5.0.535 -> 5.0.560 2019-10-09 11:59:46 +02:00
Marco Maggesi bf56c15695
hol_light: 2019-03-27 -> 2019-10-06 2019-10-09 06:13:48 +00:00
R. RyanTM a174411c3c stellarium: 0.19.1 -> 0.19.2
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2019-10-08 14:17:20 -07:00
Linus Heckemann 5aa4b19946 treewide: mark some broken packages as broken
Refs:
e6754980264fe927320d5ff2dbd24ca4fac9a160
1e9cc5b9844ef603fe160e9f671178f96200774f
793a2fe1e8bb886ca2096c5904e1193dc3268b6d
c19cf65261639f749012454932a532aa7c681e4b
f6544d618f30fae0bc4798c4387a8c7c9c047a7c
2019-10-08 17:14:26 +02:00
R. RyanTM 9ac905e03f gtkwave: 3.3.101 -> 3.3.102
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2019-10-07 12:18:42 -05:00
Marco Maggesi ff1ed720e2 Rename z77z into maggesi
Make the "handle" of the maintainer match the name of the github account.
Also update the email address.
2019-10-07 17:05:25 +02:00
markuskowa 86d97bb02c
Merge pull request #70602 from r-ryantm/auto-update/gromacs
gromacs: 2019.3 -> 2019.4
2019-10-07 14:43:39 +02:00
Markus Kowalewski ea45dc1053
gromacs: add perl to buildInputs 2019-10-07 13:03:13 +02:00
R. RyanTM 8c6ee4fe16 gromacs: 2019.3 -> 2019.4
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2019-10-07 02:48:46 -07:00
Dmitry Kalinkin cfd881dce0
Merge pull request #70161 from smaret/gildas-20191001_a
gildas: 20190901_a -> 20191001_a
2019-10-06 17:46:41 -04:00
Nikolay Amiantov de171ba0c6 cntk: partially unbreak
* Use GCC 7 to unbreak the build;
* Mark CUDA build as broken due to cub incompatibility.
2019-10-05 16:18:20 +03:00
Orivej Desh 3dc70841d3 cbc: 2.10.2 -> 2.10.3 2019-10-04 05:17:48 +00:00
Bruno Bzeznik 1ba3f3f00f SPAdes: init at 3.13.1 (#63082) 2019-10-03 09:18:48 +00:00
R. RyanTM eca416c469 verilator: 4.016 -> 4.018
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2019-10-01 21:09:12 -05:00
Sébastien Maret b444b2e956
gildas: 20190901_a -> 20191001_a 2019-10-01 10:52:50 +02:00
Timo Kaufmann 7a7e9c1b27
Merge pull request #64193 from timokau/sage-8.9
sage: 8.8 -> 8.9
2019-09-30 11:13:46 +00:00
Timo Kaufmann d9176bee70 sage: 8.9.rc1 -> 8.9 2019-09-30 11:10:10 +02:00
Ryan Mulligan 8519cd1aa0
Merge pull request #69735 from r-ryantm/auto-update/picard-tools
picard-tools: 2.20.5 -> 2.20.8
2019-09-29 15:44:33 -07:00
R. RyanTM de95a92384 star: 2.7.1a -> 2.7.2b
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2019-09-28 21:09:40 -07:00
Emily b2c482b700 verilog: extend platforms 2019-09-28 16:55:21 -05:00
Vladimír Čunát fda4a08d4a
Merge branch 'staging-next'
There are several security fixes - again, as it consists mainly of the
previously reverted staging-next merge.
2019-09-28 07:43:04 +02:00
R. RyanTM 8c397c2bc2 picard-tools: 2.20.5 -> 2.20.8
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2019-09-27 18:25:22 -07:00
Aaron Andersen af5176b430
Merge pull request #63117 from bzizou/macse
macse: init at 2.03
2019-09-27 17:26:07 -04:00
Vladimír Čunát 217cf982c7
Merge branch 'master' into staging-next 2019-09-27 22:13:02 +02:00
Marek Mahut 5c116916d6
Merge pull request #69575 from r-ryantm/auto-update/ginac
ginac: 1.7.6 -> 1.7.7
2019-09-27 22:04:49 +02:00
Michael Raskin 2213e53fcf
Merge pull request #69477 from r-ryantm/auto-update/clingo
clingo: 5.3.0 -> 5.4.0
2019-09-27 10:12:24 +00:00
Timo Kaufmann 6181a20ab2
Merge pull request #69609 from r-ryantm/auto-update/jmol
jmol: 14.29.49 -> 14.29.53
2019-09-27 09:22:11 +00:00
Joachim F ad773d31e2
Merge pull request #69345 from joachifm/feat/split-version
Replace uses of splitString for splitting version strings
2019-09-27 06:19:18 +00:00
R. RyanTM 0826d695de jmol: 14.29.49 -> 14.29.53
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2019-09-26 16:35:12 -07:00
R. RyanTM b7f156625e ginac: 1.7.6 -> 1.7.7
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2019-09-26 12:09:29 -07:00
Timo Kaufmann 4a863fa567
Merge pull request #69519 from r-ryantm/auto-update/eclib
eclib: 20190226 -> 20190909
2019-09-26 17:27:41 +00:00
Joachim Fasting bad07dfac5
tree-wide: replace uses of splitString "." with lib.versions
Quoting from the splitString docstring:

   NOTE: this function is not performant and should never be used.

This replaces trivial uses of splitString for splitting version
strings with the (potentially builtin) splitVersion.
2019-09-26 17:42:49 +02:00
R. RyanTM faf9a73e2f eclib: 20190226 -> 20190909
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Relevant sage upstream ticket: https://trac.sagemath.org/ticket/28472
2019-09-26 16:41:50 +02:00
R. RyanTM 24db075c5c eagle: 9.4.2 -> 9.5.0
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2019-09-26 05:34:41 -07:00
R. RyanTM 7653ff45cb clp: 1.17.2 -> 1.17.3
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2019-09-26 01:49:26 -07:00
Jörg Thalheim 9a1b767a55
treewide: remove empty buildInputs 2019-09-26 09:17:23 +01:00
R. RyanTM f54eb7f159 clingo: 5.3.0 -> 5.4.0
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2019-09-26 01:07:35 -07:00
Dmitry Kalinkin c455adcc42
Merge branch 'master' into staging-next
Fixes eval on darwin after #69072

Resolved conflict in pkgs/tools/security/thc-hydra/default.nix
Basically had to revert a1c0e10564 which
adapts #69210 to master that doesn't yet have
329a88efa7

Tested using maintainers/scripts/eval-release.sh before and after to see
that the fix works
2019-09-25 19:21:46 -04:00
Timo Kaufmann 78741fc409 sage: 8.9.rc0 -> 8.9.rc1 2019-09-25 10:19:04 +02:00
Timo Kaufmann 1797c9c295 sage: 8.9.beta9 -> 8.9.rc0
Sage now by default expects the lcalc library to be named Lfunction
(instead of libLfunction). This could be changed by an environment
variable (https://trac.sagemath.org/ticket/28224), but various distros
seem to agree on this standard
(https://groups.google.com/forum/#!topic/sage-packaging/xvh55IxHTZg) so
it's best just to follow it. The old standard was set by sage anyway and
sage is the only consumer of lcalc in nixpkgs.
2019-09-24 17:51:09 +02:00
Kierán Meinhardt 815d940e52 tamarin-prover: mark as broken because upstream is broken 2019-09-24 15:25:43 +02:00
Bruno Bzeznik e4108becbe macse: init at 2.03 2019-09-24 08:24:07 +02:00
Vladimír Čunát eab41878ac
Merge branch 'master' into staging-next 2019-09-24 08:14:34 +02:00
Timo Kaufmann ba9e5a2785 Merge remote-tracking branch 'upstream/master' into sage-8.9 2019-09-23 23:58:37 +02:00
Timo Kaufmann 995a728684 pynac: 0.7.25 -> 0.7.26 2019-09-23 22:08:23 +02:00
Timo Kaufmann 5aba3be6f9 sage: 8.9.beta8 -> 8.9.beta9 2019-09-23 18:50:59 +02:00
Timo Kaufmann 8593d468ae Merge remote-tracking branch 'upstream/master' into sage-8.9 2019-09-23 17:11:15 +02:00
Timo Kaufmann cbe12344ca sage: add pager to environment
Temporary fixup while waiting for an upstream fix.
2019-09-23 15:14:43 +02:00
Vladimír Čunát 22a216849b
Re-Revert "Merge branch 'staging-next'"
This reverts commit f8a8fc6c7c.
2019-09-22 09:38:09 +02:00
Vladimír Čunát f8a8fc6c7c
Revert "Merge branch 'staging-next'"
This reverts commit 41af38f372, reversing
changes made to f0fec244ca.

Let's delay this.  We have some serious regressions.
2019-09-21 20:05:09 +02:00
Vladimír Čunát 41af38f372
Merge branch 'staging-next' 2019-09-21 13:14:09 +02:00
Matthew Bauer 566796ab13
Merge pull request #69038 from matthewbauer/ncurses5
treewide: use libtinfo.so.5 where needed
2019-09-20 23:00:04 -04:00
Bjørn Forsman 5af0d0b5da kicad: fix build
Fix configure time error:
  ...
  ImportError: No module named wx
  CMake Error at CMakeModules/FindwxPython.cmake:52 (message):
    wxPython/Phoenix does not appear to be installed on the system

Only build tested.

Fixes: f7e28bf5d8 ("Split buildPythonPackage into setup hooks")
2019-09-20 08:17:58 +02:00
Will Dietz 6429696f43
libqalculate,qalculate-gtk: 3.3.0 -> 3.4.0 2019-09-18 17:05:59 -05:00
Matthew Bauer 4c85abae94 treewide: use libtinfo.so.5 where needed
This was originally added in

https://github.com/NixOS/nixpkgs/pull/21350

best to use this name for clarity.
2019-09-18 13:57:20 -04:00
Vladimír Čunát fa4a3af5a7
Merge branch 'master' into staging-next 2019-09-16 19:24:52 +02:00
Vincent Laporte 8288301636 coq_8_10: 8.10+β2 → 8.10+β3 2019-09-16 11:41:43 -05:00
Aaron Andersen 063c82fd2f
Merge pull request #68773 from mimame/update/cytoscape-3.7.2
cytoscape: 3.7.1 -> 3.7.2
2019-09-15 09:43:11 -04:00
Vladimír Čunát b6c6e1f9e8
Merge branch 'master' into staging-next 2019-09-15 13:18:54 +02:00