Commit graph

5219 commits

Author SHA1 Message Date
Sandro 3260545bc7
Merge pull request #145056 from angustrau/logisim-evolution-3.7.1 2021-11-11 14:01:44 +01:00
xaverdh 03a257e5a3
treewide: quote urls according to rfc 0045 (#145260)
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2021-11-10 11:37:56 +01:00
markuskowa 9995dbad24
Merge pull request #145251 from markuskowa/upd-gromacs
gromacs: 2021.3 -> 2021.4
2021-11-09 22:45:05 +01:00
Jörg Thalheim 584c5fc24d
Merge pull request #145161 from smancill/shogun-fix-build
shogun: refactor derivation and fix build
2021-11-09 20:49:19 +00:00
Sandro 9a9ef88b8c
Merge pull request #145178 from SuperSandro2000/applications
Applications
2021-11-09 21:33:41 +01:00
Sandro Jäckel b1c5442ceb
fixup! prover9: convert patchPhase to postPatch, cleanup meta 2021-11-09 20:26:04 +01:00
Sandro Jäckel 15d85dac80
redprl: switch to fetchFromGitHub, use postPatch 2021-11-09 20:10:31 +01:00
Sandro Jäckel 11c55d061e
prover9: convert patchPhase to postPatch, cleanup meta 2021-11-09 20:10:30 +01:00
Markus Kowalewski 430ad642a2
gromacs: 2021.3 -> 2021.4 2021-11-09 20:10:04 +01:00
Vincent Laporte b42501e1e7 proverif: 2.02pl1 → 2.03
Do not build `proverif_interact` (that was not installed).
2021-11-09 17:50:01 +01:00
Angus Trau 14580c7f4d logisim-evolution: 3.5.0 -> 3.7.1 2021-11-09 17:33:19 +11:00
Sebastián Mancilla 203db44ed4 shogun: fix compile errors with Eigen 3.4
Fixes #142811.
2021-11-09 00:27:13 -03:00
Sebastián Mancilla 82568e6718 shogun: refactor build
Main changes are:

- Build with default stdenv instead of forcing GCC 8, by applying upstream
  patches that fix building with newer compilers.

  Together with #134390 and #134393 (and the blas library fixes on #135493
  and #136535), this enables building the derivation on darwin.

- Use multiple outputs.

- Move build-only inputs to nativeBuildInputs.

- Generate the meta examples but do not compile them (they are compiled as
  part of the tests), to not make the build take more time than already is.

  Install the example source files into $doc (but do not install the
  example binaries, only the sources).

- Enable testing by setting the CMake variable CMAKE_SKIP_BUILD_RPATH to
  false (it should not be needed if #108496 is merged). This allows the
  tests to locate the shogun library and run without problems.

  Disable integration and meta tests to speed up the build.

With a few other minor changes:

- Use upstream URL for the json-c patch.

- Be explicit about which optional, commercial dependencies are not used,
  to stop CMake searching for them.

- Do not set NIX_CFLAGS_COMPILE with '-faligned-new' because it causes a
  warning when compiling C files. Set CXXFLAGS instead.

- Remove unnecessary ccache variables from the environment.

- Fix wrong Google Mock download location, which was forcing CMake to need
  network access to download the tarball to the right location (which fails
  within the sandbox).
2021-11-08 23:57:29 -03:00
Sebastián Mancilla 1e25b1831d shogun: add smancill to maintainers 2021-11-08 23:02:09 -03:00
Sebastián Mancilla 2dd5d704d5 shogun: format derivation 2021-11-08 23:01:59 -03:00
Bruno Bzeznik 4e5a245894 obitools3: removed useless python restriction 2021-11-08 07:51:48 +01:00
Sandro f2c9cf39e5
Merge pull request #145006 from Artturin/spdlogupd 2021-11-07 23:04:28 +01:00
Artturin b4fab0a98b treewide: remove fmt from buildInputs where spdlog is used
spdlog_1 has fmt_8 in propagatedBuildInputs and having fmt which points
to fmt_7 in buildInputs makes the builds use wrong fmt
2021-11-07 22:05:08 +02:00
Felix Buehler b52ab3b712 pkgs/applications: rename name to pname&version part 2 2021-11-07 14:53:06 +01:00
Justin Bedő 7016c7df1c
Merge pull request #144820 from NixOS/r-updates
R,rPackages: R 4.1.1 -> 4.1.2, rPackages BioC 3.13 -> 3.14
2021-11-07 08:12:10 +11:00
Matt Christ 065281add0 cemu: mark as broken on darwin
https://github.com/NixOS/nixpkgs/pull/144889#issuecomment-962469610
2021-11-06 13:54:44 -07:00
Matt Christ 2771743966 cemu: add link-time-compile-gen, build with gcc9stdenv 2021-11-06 13:54:44 -07:00
Ellie Hermaszewska 03f9ced512
picoscope: 6.14.44 -> 7.0.83 2021-11-06 17:32:49 +08:00
Michael Raskin d8b7d0e066
Merge pull request #123511 from yorickvP/yorick-picoscope
picoscope: init at 6.14.44-4r5870
2021-11-06 08:48:13 +00:00
Alyssa Ross 02dfbde639
treewide: use mirror URLs where available
Candidates identified with

	git grep -F "$(grep -v '#' pkgs/build-support/fetchurl/mirrors.nix |
		grep -v nixos.org | grep :// | cut -d '"' -f 2)"

and then manually reviewed and tested.
2021-11-06 01:56:39 +00:00
Florian Klink 3097a43496 xmedcon: 0.21.0 -> 0.21.2
in release 0.21.2 @ 20-Jul-2021 (Gtk+3)

    Small addition in our speedometer CSS theme: window titlebar is now in dark mode too
    Learned how to leave out annoying autotools reconfigure rules from Makefiles via AM_MAINTAINER_MODE macro
        Why? working with most recent autotools version <> older autotools version on most systems <> users are not necessarily developers ...
    Improvements for Wayland (CentOS Stream / OpenSUSE Tumbleweed)
        Menu "Online info" core dumps due to "toplevel" window problem
        Check "Gdk-CRITICAL gdk_monitor_get_workarea: assertion 'GDK_IS_MONITOR ()' failed"
        gtk_window_set_transient_for(window, parent)
        Not working GBC-widget (gamma, brightness, contrast)

in release 0.21.1 @ 01-May-2021 (Gtk+3)

    Require libpng >= 1.6.0 for Ubuntu's sake
    Added in GUI resizing to fifth and quint
    Secured two sprintf() statements
    Updated Inno Setup file for Gtk+3 dependencies
    Fresh update of application icon
    GIF89a: write "XMedCon" in application block
2021-11-05 15:30:51 +01:00
Florian Klink 0886f51b37 xmedcon: fix meta.platforms
platforms.darwin and platforms.linux are both lists. They need to be
concatenated, otherwise they're not recognized as supported platforms.
2021-11-05 15:30:51 +01:00
Mauricio Collares 076563ebac sage: import sympy 1.9 update patch 2021-11-04 18:53:06 +01:00
Justin Bedő a5ac0a33a7
Merge pull request #144529 from r-ryantm/auto-update/picard-tools
picard-tools: 2.26.3 -> 2.26.4
2021-11-04 07:19:02 +11:00
R. Ryantm 509a8c298f picard-tools: 2.26.3 -> 2.26.4 2021-11-03 19:57:00 +00:00
Michael Raskin df3adb0398
Merge pull request #144502 from r-ryantm/auto-update/opensmt
opensmt: 2.1.1 -> 2.2.0
2021-11-03 18:23:06 +00:00
R. Ryantm 8fed17e682 opensmt: 2.1.1 -> 2.2.0 2021-11-03 18:03:12 +00:00
Bobby Rong 1c78751423
Merge pull request #144416 from bobby285271/mainprogram
treewide: set meta.mainProgram for packages teams.pantheon.members maintain
2021-11-03 20:10:33 +08:00
Bobby Rong 2483e778d4
treewide: set meta.mainProgram for packages teams.pantheon.members maintain 2021-11-03 19:07:21 +08:00
Artturi 0099cd6289
Merge pull request #137636 from bzizou/obitools 2021-11-03 12:30:53 +02:00
Bruno Bzeznik 0d9ec2d3f0 obitools3: fix build on aarch64 + formatting 2021-11-03 11:59:05 +02:00
R. Ryantm 14ee52edff elan: 1.3.0 -> 1.3.1
(cherry picked from commit 4cb7820ac9)
2021-11-03 10:51:13 +01:00
Artturi 74f25e606c
Merge pull request #143613 from r-ryantm/auto-update/cytoscape
cytoscape: 3.8.2 -> 3.9.0
2021-11-02 14:39:53 +02:00
Artturi 495f6106d5
Merge pull request #144226 from r-ryantm/auto-update/antiprism
antiprism: 0.26 -> 0.29
2021-11-02 14:19:37 +02:00
Artturi ff29a7175b
Merge pull request #143618 from r-ryantm/auto-update/dcm2niix
dcm2niix: 1.0.20210317 -> 1.0.20211006
2021-11-02 13:58:10 +02:00
R. Ryantm 253e9ecfab antiprism: 0.26 -> 0.29 2021-11-02 11:08:06 +00:00
Justin Bedo 257a939cfc
R: 4.1.1 -> 4.1.2 2021-11-02 17:42:34 +11:00
github-actions[bot] d27dd6653e
Merge master into staging-next 2021-11-02 00:01:32 +00:00
Vincent Laporte f727a6aebe why3: remove spurious camlp5 dependency 2021-11-01 20:37:57 +01:00
Mauricio Collares 89d7336c20 lean: 3.34.0 -> 3.35.0 2021-11-01 19:17:17 +01:00
Mauricio Collares c707a468a4 lean: 3.33.0 -> 3.34.0 2021-11-01 19:17:17 +01:00
github-actions[bot] bd0051cd54
Merge master into staging-next 2021-11-01 18:01:02 +00:00
Gabriel Ebner f13aa788e1 elan: 1.2.0 -> 1.3.0 2021-11-01 13:37:56 +01:00
github-actions[bot] 7eaf56d92e
Merge master into staging-next 2021-11-01 00:01:32 +00:00
Sandro dcc0ba6967
Merge pull request #144043 from Smaug123/lean-darwin 2021-10-31 23:39:39 +01:00