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9002 commits

Author SHA1 Message Date
Pol Dellaiera 6c2979370b
Merge pull request #290850 from raboof/gnucap-by-name 
gnucap: move to by-name
 2024-02-23 22:58:44 +01:00
R. Ryantm 6643d56edb snakemake: 8.4.8 -> 8.4.12 2024-02-23 12:38:33 -05:00
Mario Rodas 03c08e4262
Merge pull request #290735 from marsam/update-elan 
elan: 3.1.0 -> 3.1.1
 2024-02-23 06:11:10 -05:00
Arnout Engelen 68d9ecff4c
gnucap: move to by-name 
tested gnucap-full still works as well
 2024-02-23 12:01:37 +01:00
Justin Bedő 26037c1a65
Merge pull request #290162 from trofi/octopus-caller-gcc-13-fix 
octopus-caller: fix `gcc-13` build failure (drop `-Werror`)
 2024-02-23 09:38:42 +11:00
markuskowa b665514a11
Merge pull request #290665 from markuskowa/fix-gromacs 
gromacs: fix CUDA build
 2024-02-22 22:01:26 +01:00
Markus Kowalewski f6616d2e3a gromacs: require single precssion when building with CUDA 2024-02-22 17:47:11 +01:00
Markus Kowalewski eb93eb95ac gromacs: fix CUDA build 2024-02-22 17:39:02 +01:00
Mauricio Collares 464832df1d
Merge pull request #290040 from r-ryantm/auto-update/primesieve 
primesieve: 11.2 -> 12.0
 2024-02-22 10:21:06 +01:00
Fabian Affolter 85611f8249
Merge pull request #290454 from fabaff/strictdoc-fix 
strictdoc: refactor
 2024-02-22 08:33:27 +01:00
Mario Rodas e4de5ceffd elan: 3.1.0 -> 3.1.1 
Diff: https://github.com/leanprover/elan/compare/v3.1.0...v3.1.1

Changelog: https://github.com/leanprover/elan/blob/v3.1.1/CHANGELOG.md
 2024-02-22 04:20:00 +00:00
Nikolay Korotkiy ca4179166e
Merge pull request #290031 from voidIess/master 
geogebra: linked icon to archive.org
 2024-02-22 00:56:29 +04:00
Fabian Affolter ec4408d8b4 strictdoc: refactor 2024-02-21 17:33:31 +01:00
Arnout Engelen 8b1ad909bd
Merge pull request #256087 from raboof/gnucap-update 
gnucap: update to 20240130-dev and add gnucap-modelgen-verilog
 2024-02-20 23:43:07 +01:00
markuskowa a39a9ee214
Merge pull request #288514 from sheepforce/avogadro2 
avogadro2: 1.98.1 -> 1.99.0
 2024-02-20 14:25:01 +01:00
Phillip Seeber 2a876140a8 openmolcas: 23.10 -> 24.02 2024-02-20 10:41:51 +01:00
Sergei Trofimovich 75f093fed6 octopus-caller: fix gcc-13 build failure (drop -Werror) 
Without the change the build on `master` fails as
https://hydra.nixos.org/build/249090788:

    /build/source/src/config/option_collation.cpp: In function 'auto octopus::options::make_variant_generator_builder(const OptionMap&, boost::optional<const octopus::ReadSetProfile&>)':
    /build/source/src/config/option_collation.cpp:1298: error: redundant move in initialization [-Werror=redundant-move]
     1298 |                 throw ConflictingSourceVariantFile {std::move(source_path), *output_path};
          |

Blanket `-Werror` frequently causes build failures unless upstream is
quick at addressing build failures.
 2024-02-20 09:39:27 +00:00
Julius Schmitt a18382a83b geogebra: linked icon to archive.org 2024-02-19 22:27:53 +01:00
R. Ryantm 929ed3cde7 primesieve: 11.2 -> 12.0 2024-02-19 21:11:46 +00:00
Fabian Affolter 4646a0c7db sasview: add changelog to meta 2024-02-19 16:02:14 +01:00
Fabian Affolter 711d382967 sasview: 5.0.4 -> 5.0.6 
Diff: https://github.com/SasView/sasview/compare/refs/tags/v5.0.4...v5.0.6
 2024-02-19 16:01:09 +01:00
Mario Rodas e27d391266
Merge pull request #289941 from marsam/update-elan 
elan: 3.0.0 -> 3.1.0
 2024-02-19 09:25:45 -05:00
OTABI Tomoya 9e52c50c55
Merge pull request #289381 from r-ryantm/auto-update/snakemake 
snakemake: 8.4.4 -> 8.4.8
 2024-02-19 23:16:21 +09:00
R. Ryantm acb4c80843 clingo: 5.7.0 -> 5.7.1 2024-02-19 09:11:09 +00:00
Mario Rodas 41dd647a85 elan: 3.0.0 -> 3.1.0 
Diff: https://github.com/leanprover/elan/compare/v3.0.0...v3.1.0

Changelog: https://github.com/leanprover/elan/blob/v3.1.0/CHANGELOG.md
 2024-02-19 04:20:00 +00:00
Mario Rodas 9c3d856bed
Merge pull request #289312 from r-ryantm/auto-update/qucs-s 
qucs-s: 2.1.0 -> 24.1.0
 2024-02-18 17:57:27 -05:00
Dmitry Kalinkin cb6f36e8ff
xrootd: fix plugin loading on Linux (#289140) 2024-02-17 15:38:01 -05:00
Mario Rodas 99b92cf3e0
Merge pull request #288000 from trofi/timeloop-gcc-13-fix 
timeloop: unstable-2022-11-29 -> 3.0.3, fix `gcc-13` build failure
 2024-02-17 07:19:06 -05:00
R. Ryantm 2444fc7fa5 snakemake: 8.4.4 -> 8.4.8 2024-02-16 21:15:11 +00:00
R. Ryantm fd5be7589c qucs-s: 2.1.0 -> 24.1.0 2024-02-16 15:39:58 +00:00
OTABI Tomoya dbbd7412af
Merge pull request #289197 from r-ryantm/auto-update/qtrvsim 
qtrvsim: 0.9.6 -> 0.9.7
 2024-02-16 21:24:57 +09:00
7c6f434c 330ab32380
Merge pull request #289178 from r-ryantm/auto-update/clingo 
clingo: 5.6.2 -> 5.7.0
 2024-02-16 07:43:56 +00:00
R. Ryantm e2351c1c52 qtrvsim: 0.9.6 -> 0.9.7 2024-02-16 02:36:23 +00:00
R. Ryantm ac0579e7c9 clingo: 5.6.2 -> 5.7.0 2024-02-16 01:36:49 +00:00
Justin Bedő db83508472
Merge pull request #288810 from r-ryantm/auto-update/last 
last: 1540 -> 1541
 2024-02-16 12:26:05 +11:00
Pol Dellaiera a53894b556
Merge pull request #288470 from McSinyx/stp-u8 
stp: fix build failure
 2024-02-15 23:07:44 +01:00
Weijia Wang 11a28beb53 openmolcas: bump boost version 2024-02-15 07:57:44 +01:00
Mario Rodas 46a93d0751
Merge pull request #287601 from trofi/stp-gcc-13-fix 
stp: fix the build against `gcc-13`
 2024-02-14 20:17:23 -05:00
Dmitry Kalinkin 3b27f2ac6e
xfitter: fix for recent clang (#288816) 2024-02-14 18:51:35 -05:00
Dmitry Kalinkin 419da635c6
Merge pull request #285505 from GaetanLepage/xroot 
xrootd: 5.5.5 -> 5.6.6, python311Packages.xrootd: init at 5.6.6
 2024-02-14 11:15:22 -05:00
R. Ryantm 55fab6dfd9 last: 1540 -> 1541 2024-02-14 15:51:25 +00:00
Nick Cao a42f5c6d1a
Merge pull request #256126 from bouk/openmvg-use-nixpkgs-libraries 
openmvg: unstable-2022-12-30 -> 2.1
 2024-02-14 09:31:01 -05:00
Bouke van der Bijl 91414c639f openmvg: unstable-2022-12-30 -> 2.1 
* Use the nixpkgs libraries instead of the vendored ones
* Add updateScript

Co-authored-by: Nick Cao <nickcao@nichi.co>
 2024-02-14 11:23:46 +01:00
Phillip Seeber 06a5108a6c avogadro2: 1.98.1 -> 1.99.0 2024-02-14 10:46:01 +01:00
kirillrdy 399d51fba7
Merge pull request #287721 from trofi/megahit-gcc-13-fix 
megahit: fix `gcc-13` build failure
 2024-02-14 20:22:18 +11:00
kirillrdy cd54cfb658
Merge pull request #287985 from trofi/svaba-gcc-13-fix 
svaba: fix `gcc-13` build failure
 2024-02-14 20:07:39 +11:00
Gaetan Lepage 7b9e11995d xrootd: 5.5.5 -> 5.6.6 
Changelog: https://github.com/xrootd/xrootd/releases/tag/v5.6.6

Structured attrs don't work with cmakeFlags - only first item is passed.

Co-authored-by: Dmitry Kalinkin <dmitry.kalinkin@gmail.com>
 2024-02-13 16:45:54 -05:00
Sergei Trofimovich 3bbdc26df2 timeloop: unstable-2022-11-29 -> 3.0.3 
Changes:
- https://github.com/NVlabs/timeloop/releases/tag/v3.0
- https://github.com/NVlabs/timeloop/releases/tag/v3.0.1
- https://github.com/NVlabs/timeloop/releases/tag/v3.0.2
- https://github.com/NVlabs/timeloop/releases/tag/v3.0.3
 2024-02-13 08:19:21 +00:00
Nguyễn Gia Phong b63babd55d
stp: fix build failure 2024-02-13 16:41:23 +09:00
Vincent Laporte 8601deaed1 cryptoverif: 2.07 → 2.08pl1 2024-02-13 06:23:27 +01:00