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Author SHA1 Message Date
Frederik Rietdijk 23be4a8b4d Merge master into staging-next 2020-04-21 19:59:56 +02:00
Frederik Rietdijk ec21df329a
Merge pull request #85636 from matthewbauer/blas-lapack-fix-fallout-from-83888 
BLAS/LAPACK fix fallout from #83888
 2020-04-21 19:59:16 +02:00
Frederik Rietdijk e7593313a6
Merge pull request #84354 from bandresen/clj-kondo_2020.03.20->2020.04.05 
clj-kondo: 2020.03.20 -> 2020.04.05
 2020-04-21 19:51:08 +02:00
Kevin Rauscher 080e82493b metals: 0.8.3 -> 0.8.4 2020-04-21 19:43:53 +02:00
Frederik Rietdijk bae8756c1a libyaml: 0.2.3 -> 0.2.4 2020-04-21 18:43:47 +02:00
Mario Rodas 9d81c54b31 opam: add marsam to maintainers 2020-04-21 15:49:43 +02:00
Mario Rodas 05cfa5ff99 opam: 2.0.6 -> 2.0.7 2020-04-21 15:49:43 +02:00
Mario Rodas 6a03fa96ea
Merge pull request #85411 from anmonteiro/anmonteiro/bs-platform-7.3.1 
bs-platform: 7.2.0 -> 7.3.1
 2020-04-21 08:01:11 -05:00
Mario Rodas 357054b656
Merge pull request #85648 from xrelkd/update/cargo-expand 
cargo-expand: 0.4.19 -> 0.5.0
 2020-04-21 07:16:13 -05:00
Frederik Rietdijk cf1a68360e python2: 2.7.17 -> 2.7.18 2020-04-21 11:21:39 +02:00
Vincent Laporte 22a3bf9fb9
Merge pull request #85142 from sternenseemann/mirage-crypto 
ocamlPackages: jackline: switch to mirage-crypto and update dependencies
 2020-04-21 08:56:52 +02:00
Mario Rodas 1a36927174 ocamlformat: 0.14.0 -> 0.14.1 
Changelog: https://github.com/ocaml-ppx/ocamlformat/releases/tag/0.14.1
 2020-04-21 08:56:19 +02:00
Vincent Laporte 974920ccd4 ocamlPackages.alcotest: 0.8.5 → 1.0.1 2020-04-21 08:47:40 +02:00
Vincent Laporte fc317e100a ocamlPackages.digestif: fix tests for alcotest ≥ 1.0 2020-04-21 08:47:40 +02:00
Vincent Laporte 36632263e0 ocamlPackages.base64: fix tests for alcotest ≥ 1.0 2020-04-21 08:47:40 +02:00
Vincent Laporte f2788cdf11 ocamlPackages.angstrom: disable tests for OCaml < 4.05 2020-04-21 08:47:40 +02:00
Vincent Laporte 1bdf4d121b ocamlPackages.bigstringaf: disable tests for OCaml < 4.05 2020-04-21 08:47:40 +02:00
R. RyanTM aaddfc0c5b libunwind: 1.3.1 -> 1.4.0 2020-04-21 08:41:13 +02:00
R. RyanTM 6a64dbefd0 libnetfilter_conntrack: 1.0.7 -> 1.0.8 2020-04-21 08:40:58 +02:00
Lancelot SIX 6c162416ca bison: 3.5.2 -> 3.5.4 2020-04-21 08:40:37 +02:00
R. RyanTM 0293a4b37f waf: 2.0.19 -> 2.0.20 2020-04-21 08:40:14 +02:00
R. RyanTM 640186a866 libvdpau: 1.3 -> 1.4 2020-04-21 08:38:50 +02:00
R. RyanTM 4613022b5d libyaml: 0.2.2 -> 0.2.3 2020-04-21 08:37:46 +02:00
Jörg Thalheim c88f04cb93 gpgme: convert macos sed patch scripts to patch files 
This is less brittle and breaks loud if the code changes.
Also remove the /usr/bin/file patch. It is not really required
for the build to work, the generated warning is harmless.
 2020-04-21 08:37:12 +02:00
Kirill Elagin 5470d96645 pgpgme: Fix build with python on macOS 
* Replace LD_LIBRARY_PATH with OS-specific name (e.g. DYLD_LIBRARY_PATH
  on macOS).
* Disable Python tests on macOS, because they use gpg, which fails due
  to a very long socket path (https://github.com/NixOS/nix/pull/1085).

The former should be fixed upstream. The latter is a Nix-specific issue,
but it can be worked-around upstream by making Python tests respect
--disable-gpg-test.
 2020-04-21 08:37:12 +02:00
R. RyanTM c9576a4b74 doxygen: 1.8.17 -> 1.8.18 2020-04-21 08:33:04 +02:00
Jan Tojnar 9073a0cb8b meson: 0.53.2 → 0.54.0 
https://mesonbuild.com/Release-notes-for-0-54-0.html
 2020-04-21 08:32:39 +02:00
Pavol Rusnak 3c83abd60f libfido2: 1.3.1 -> 1.4.0 
- drop upstreamed patches
- use system hidapi
 2020-04-21 08:31:37 +02:00
Frederik Rietdijk 803b3d296c Merge staging-next into staging 2020-04-21 08:29:51 +02:00
Frederik Rietdijk ef1679a038
Merge pull request #85171 from bcdarwin/python3-mayavi 
python3Packages.mayavi: update from Python 2 to Python 3 (and switch from wxPython to pyqt5)
 2020-04-21 08:01:57 +02:00
Dmitry Kalinkin c7d4882ab1
python3Packages.matplotlib: 3.1.3 -> 3.2.1, and various cleanups (#84362) 
* pythonPackages.matplotlib: add veprbl to maintainers

* pythonPackages.matplotlib: remove an old darwin hack

* pythonPackages.matplotlib: remove python and stdenv from buildInputs

* python3Packages.matplotlib: remove a hack for python33

* pythonPackages.matplotlib: remove outdated checkPhase

Downloading the baseline_images is not a real issue, building against
older freetype (local_freetype = True) is, perhaps, not what we
want. The good news is that the tests would pass (tested on 3.2.1) if
we were to enable them:

========== 6684 passed, 1332 skipped, 10 xfailed in 228.64s (0:03:48) ==========

* pythonPackages.matplotlib: provide setup.cfg from a file instead of a patch

* python3Packages.matplotlib: 3.1.3 -> 3.2.1
 2020-04-21 07:56:13 +02:00
Ben Darwin fe07e2b2ac elastix: enable tests 2020-04-21 07:54:59 +02:00
Ben Darwin 30cafee8b6 elastix: python -> python3 2020-04-21 07:54:59 +02:00
Raphael Borun Das Gupta 5dc6f02d77 lektor: fix "ImportError: No module named pkg_resources" 2020-04-21 07:42:35 +02:00
John Ericson 607522c78d numpy: Use blas and lapack dev outputs for include dirs 2020-04-20 21:40:48 -04:00
xrelkd fd580728d9 cargo-expand: 0.4.19 -> 0.5.0 2020-04-21 09:23:53 +08:00
Matthew Bauer a6a502fca0 magma: remove mklSupport flag 
This now relies on the "blas" and "lapack" packages.
 2020-04-20 16:02:57 -05:00
Matthew Bauer ff2f2644f8 blas,lapack: use isILP64 instead of is64bit 
This is a better name since we have multiple 64-bit things that could
be referred to.

LP64  : integer=32, long=64, pointer=64
ILP64 : integer=64, long=64, pointer=64
 2020-04-20 16:02:43 -05:00
Matthew Bauer 015f46beba numpy: set lapack,blas library names correctly 2020-04-20 13:53:29 -05:00
markuskowa 3bbd074217
Merge pull request #79953 from r-ryantm/auto-update/mdds 
mdds: 1.5.0 -> 1.6.0
 2020-04-20 20:27:22 +02:00
markuskowa e18bb6fa83
Merge pull request #84340 from r-ryantm/auto-update/byacc 
byacc: 20191125 -> 20200330
 2020-04-20 19:03:13 +02:00
markuskowa 52df4fa7d0
Merge pull request #83752 from r-ryantm/auto-update/netcdf 
netcdf: 4.7.3 -> 4.7.4
 2020-04-20 18:59:17 +02:00
Lars Jellema b674acee6e ghdl: init at 0.37 2020-04-20 14:41:22 +02:00
Lars Jellema 8e79583510 gnat: init at 9.3.0 2020-04-20 14:41:22 +02:00
worldofpeace 63bb75a4d9
Merge pull request #85488 from lionello/ldc-bootstrap 
ldc: 1.17.0 -> 1.20.1
 2020-04-20 08:15:20 -04:00
Léo Gaspard 203955fa0c
Merge pull request #82714 from delroth/s3tc 
libtxc_dxtn{,_s2tc}: remove from nixpkgs + hardware.opengl options
 2020-04-20 13:41:47 +02:00
Jörg Thalheim 216237e349
Merge pull request #85579 from siriobalmelli-foss/fix/howdoi 2020-04-20 10:41:53 +01:00
Mario Rodas b3c3a0bd18 dune_2: 2.5.0 -> 2.5.1 
Changelog: https://github.com/ocaml/dune/releases/tag/2.5.1
 2020-04-20 09:08:36 +02:00
Pierre Bourdon f52443efae pythonPackages.pyopengl: avoid dragging in 500M of -dev packages 
Only the actual shared libraries are required to be installed, and they
are imported directly by path via ctypes. The package's patchPhase
already takes care of embedding the Nix store paths of the required
libraries into pyopengl.

This reduces the transitive closure size of PyOpenGL: 622M -> 136M.
 2020-04-20 08:54:36 +02:00
Vincent Laporte 3e7a2b9147 ocamlPackages.janeStreet: 0.12 → 0.13 
ocamlPackages.bistro: fix for core-0.13
ocamlPackages.phylogenetics: 2020-01-05 → 2020-01-25
 2020-04-20 08:38:31 +02:00