nixpkgs/pkgs/development/python-modules/pyvcf/default.nix
scalavision 535a7006ea truvari: init at 1.3.2 (#70877)
pythonPackages.pyvcf: init at 0.6.8
2019-10-24 17:06:42 -04:00

33 lines
953 B
Nix

{ lib
, buildPythonPackage
, fetchFromGitHub
, pytest
}:
buildPythonPackage rec {
pname = "PyVCF";
version = "0.6.8";
src = fetchFromGitHub {
owner = "jamescasbon";
repo = "PyVCF";
rev = "476169cd457ba0caa6b998b301a4d91e975251d9";
sha256 = "0qf9lwj7r2hjjp4bd4vc7nayrhblfm4qcqs4dbd43a6p4bj2jv5p";
};
checkInputs = [ pytest ];
meta = with lib; {
homepage = "https://pyvcf.readthedocs.io/en/latest/index.html";
description = "A VCF (Variant Call Format) Parser for Python, supporting version 4.0 and 4.1";
license = licenses.bsd3;
maintainers = with maintainers; [ scalavision ];
longDescription = ''
The intent of this module is to mimic the csv module in the Python stdlib,
as opposed to more flexible serialization formats like JSON or YAML.
vcf will attempt to parse the content of each record based on the data
types specified in the meta-information lines
'';
};
}