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Author SHA1 Message Date
Michael Raskin 14f65f0dc5
Merge pull request #116365 from omasanori/sage-9.3 
sage: 9.2 -> 9.3
 2021-04-25 21:17:32 +00:00
github-actions[bot] 9a945aac72
Merge staging-next into staging 2021-04-25 18:14:18 +00:00
Eduardo Sánchez Muñoz 6b9e396a07 qalculate-gtk: 3.17.0 -> 3.18.0 2021-04-25 16:17:26 +02:00
github-actions[bot] 0d97d9f23b
Merge staging-next into staging 2021-04-23 00:15:42 +00:00
github-actions[bot] 481a9bc47c
Merge master into staging-next 2021-04-23 00:15:39 +00:00
R. RyanTM e230004975 calc: 2.12.9.1 -> 2.13.0.1 2021-04-22 06:59:52 +00:00
Masanori Ogino 090b71f627 sage: 9.2 -> 9.3.rc4 
Co-authored-by: Mauricio Collares <mauricio@collares.org>
 2021-04-22 14:06:56 +09:00
Mauricio Collares 00d2e24395 eclib: 20210223 -> 20190909 
This reverts commits 003705ef08
and ef615b5a61.
 2021-04-22 14:06:56 +09:00
Garaba Flórián a0f410646c sage: use threejs fork 2021-04-22 14:06:56 +09:00
Mauricio Collares 090165d7c1 singular: disable vspace on aarch64 2021-04-22 14:06:56 +09:00
Mauricio Collares cd7cf5942b singular: use older autoconf macro to unbreak aarch64 2021-04-22 09:01:30 +09:00
Mauricio Collares aebef1703f singular: import aarch64 support patch 2021-04-22 09:01:07 +09:00
Timo Kaufmann ceaf48fdb2 singular: 4.1.1p2 -> 4.2.0p2 
Adds proper tests. Also removes the "enableFactory" option because
singular actually enables factory by default and explicitly disabling it
breaks the build. So the option was never really available.
 2021-04-22 09:01:07 +09:00
Mauricio Collares cd215e793a pynac: 0.7.26 -> 0.7.27 2021-04-22 09:01:07 +09:00
Mauricio Collares 79046fb4f8 gap: 4.10.2 -> 4.11.0 2021-04-22 09:01:07 +09:00
github-actions[bot] cf0edc0dea
Merge staging-next into staging 2021-04-20 06:06:28 +00:00
github-actions[bot] e605a07cc0
Merge master into staging-next 2021-04-20 06:06:25 +00:00
R. RyanTM 44a83a3cb6 gmsh: 4.8.0 -> 4.8.1 2021-04-19 22:37:39 -04:00
Alyssa Ross e459db3f81 glsurf: fix license 
The README says GPL 2 or any later version, not LGPL.
 2021-04-16 14:06:10 +00:00
Alyssa Ross 70e33e3ae3 glsurf: use current giflib 
This requires bumping the version of camlimages used by glsurf to a
version that supports current giflib.  The most recent versions of
camlimages (even of 4.x) don't support ocaml 4.01 any more, so I've
upgraded to 4.1.2 here, the last version that supports ocaml 4.01 (and
which happily supports current giflib).
 2021-04-16 14:06:10 +00:00
Alyssa Ross 6e3b5fd046 libungif: remove in favour of giflib 
libungif was merged into giflib in 2006, and hasn't been updated
since.  All non-broken packages still using it build fine with giflib.

See <http://giflib.sourceforge.net/history.html>.
 2021-04-16 14:06:10 +00:00
github-actions[bot] 1bd1969867
Merge staging-next into staging 2021-04-06 18:15:33 +00:00
voidless b6c315b4fb geogebra6: 6_0_620_0 -> 6_0_631_0 2021-04-06 10:52:30 +02:00
Frederik Rietdijk 1e7ed8b2f3
Merge branch 'staging' into python-unstable 2021-04-04 12:59:12 +02:00
Frederik Rietdijk c12ef05bda sage: keep cypari2 at 2.1.1 2021-04-03 17:49:44 +02:00
Frederik Rietdijk 7368564f99 gurobi: stay with python2 2021-04-03 17:06:08 +02:00
Frederik Rietdijk ee258981bf ginac: use python3 2021-04-03 17:06:07 +02:00
R. RyanTM 190a6f04b6 calc: 2.12.9.0 -> 2.12.9.1 2021-03-27 07:21:16 +00:00
Dominic Steinitz 9eb60bee0e Fix https://github.com/NixOS/nixpkgs/issues/117715 2021-03-26 18:18:42 +00:00
Timo Kaufmann 82e1bfa53d
Merge pull request #117123 from collares/cypari-update 
cypari2, cysignals: updates
 2021-03-24 21:38:04 +00:00
Mauricio Collares 812ffed96b gap: backport aarch64 patch 2021-03-23 22:09:29 -03:00
Mauricio Collares 594eda3b7d sage: patch intermittently failing test 2021-03-23 22:09:29 -03:00
Mauricio Collares 15fd117e71 cypari2: 2.1.1 -> 2.1.2 
* cypari2: 2.1.1 -> 2.1.2, patch to fix segfault

* sage: update test expectations
 2021-03-23 22:09:29 -03:00
Sandro 1c3d923aaa
Merge pull request #115685 from r-ryantm/auto-update/wxmaxima 
wxmaxima: 20.06.6 -> 21.02.0
 2021-03-22 01:08:42 +01:00
Mauricio Collares c0b869f19f sage: re-add pkgconfig input, it's not duplicated 2021-03-20 06:43:23 -03:00
Jan Tojnar 0136206b12
Merge branch 'master' into staging-next 2021-03-18 13:35:59 +01:00
Sandro fe4a249718
Merge pull request #116594 from NixOS/SuperSandro2000-patch-1 
sage: remove duplicated pkgconfig
 2021-03-17 11:10:10 +01:00
Sandro 2d01f4a96a
sage: remove duplicated pkgconfig 2021-03-17 09:24:07 +01:00
Samuel Gräfenstein b72ee5775c
treewide: gnome2.gtk -> gtk2 
Fix building with `config.allowAliases = false;`.
 2021-03-17 00:00:16 +01:00
github-actions[bot] 3b97019142
Merge master into staging-next 2021-03-14 06:17:28 +00:00
R. RyanTM 621f19d89c calc: 2.12.8.2 -> 2.12.9.0 2021-03-13 23:43:28 -05:00
github-actions[bot] d6257d451b
Merge master into staging-next 2021-03-11 18:23:54 +00:00
R. RyanTM 6dc1177c24 wxmaxima: 20.06.6 -> 21.02.0 2021-03-10 03:37:07 +00:00
Mauricio Collares f80271c7f0 sage: remove usage of deprecated numpy aliases 2021-03-09 21:28:46 -03:00
Mauricio Collares 3f02cdae14 sage: reenable pexpect interrupt test 2021-03-09 21:28:46 -03:00
Mauricio Collares edc78bb31f sage: update test expectations for arb and giac, prepare for pari 2.13 2021-03-09 20:54:55 -03:00
Mauricio Collares a0f55e48fa sage: use fetchSageDiff whenever possible 2021-03-09 20:54:55 -03:00
R. RyanTM 4142ae19e8 palp: 2.11 -> 2.20 2021-03-09 20:54:55 -03:00
Mauricio Collares d508147edc giac: 1.5.0-87 -> 1.6.0-47 2021-03-09 20:54:55 -03:00
Martin Weinelt 16f9e4da3a
Merge branch 'master' into staging-next 2021-03-09 17:05:41 +01:00
R. RyanTM 97a6e6e702 qalculate-gtk: 3.16.0 -> 3.17.0 2021-03-09 09:26:04 +00:00
github-actions[bot] dd7cbca2a6
Merge master into staging-next 2021-03-09 06:17:35 +00:00
Mario Rodas 7e99e0f339
Merge pull request #115404 from r-ryantm/auto-update/gmsh 
gmsh: 4.7.1 -> 4.8.0
 2021-03-08 19:45:08 -05:00
Frederik Rietdijk 277d488026 Merge staging into staging-next 2021-03-08 19:20:18 +01:00
R. RyanTM 435eaafaf1 gmsh: 4.7.1 -> 4.8.0 2021-03-08 11:54:52 +00:00
Sandro Jäckel 0207c32eff
giac: remove ? null 2021-03-08 02:01:15 +01:00
Sandro Jäckel b7befb3522
palp: format 2021-03-08 02:01:15 +01:00
github-actions[bot] 65cddb74d7
Merge staging-next into staging 2021-03-07 06:17:25 +00:00
Mauricio Collares ef615b5a61 sage: adapt for eclib output format changes 2021-03-06 12:28:52 -03:00
Jan Tojnar 6d1958ad2d
Merge branch 'staging-next' into staging 2021-03-04 22:16:45 +01:00
Sandro Jäckel 086e9e0978
R: switch to pname + version 2021-03-04 03:47:33 +01:00
github-actions[bot] e8162c62e3
Merge staging-next into staging 2021-02-27 00:37:54 +00:00
Vijay Lulla 2c9d7ee369 R: 4.0.3 -> 4.0.4 2021-02-26 22:42:21 +00:00
github-actions[bot] ec3729e487
Merge staging-next into staging 2021-02-26 18:16:46 +00:00
Timo Kaufmann be504fc82a
Merge pull request #113603 from collares/sage-test-fixes 
sage: disable intermittent test and fix threejs breakage
 2021-02-26 13:27:44 +00:00
Robert Schütz 54757b35c1 Merge branch 'staging-next' into staging 2021-02-26 10:56:17 +01:00
Frederik Rietdijk c456a2512f Merge master into staging-next 2021-02-26 10:25:13 +01:00
Mauricio Collares 4718aea896 sage: use slightly more robust way of getting threejs version 2021-02-25 22:31:27 -03:00
Mauricio Collares 7efa803a4b sage: disable intermittent test 2021-02-25 22:31:27 -03:00
Sandro ad06c82b9c
Merge pull request #113965 from SuperSandro2000/fix-collection17 2021-02-23 08:44:14 +01:00
Fabian Affolter a3343fc6b9 calc: specify license 2021-02-22 14:21:33 -05:00
github-actions[bot] ed07c63105
Merge staging-next into staging 2021-02-22 06:17:08 +00:00
github-actions[bot] 227aa2c9b0
Merge master into staging-next 2021-02-22 06:17:05 +00:00
Thomas Bereknyei d3833fbe25 calc: nixpkgs-review fixes 2021-02-22 00:56:59 -05:00
R. RyanTM 840822c280 calc: 2.12.8.1 -> 2.12.8.2 2021-02-22 00:56:59 -05:00
Sandro Jäckel dcc2d18867
nasc: remove unused input 2021-02-22 02:27:56 +01:00
Ben Siraphob 127733211e
treewide: unzip buildInputs to nativeBuildInputs (#112302) 2021-02-20 16:01:53 -05:00
Robert T. McGibbon 40062e431b cbc: 2.10.3 -> 2.10.4 2021-02-20 15:41:18 -05:00
github-actions[bot] abe7db36a4
Merge staging-next into staging 2021-02-20 00:36:40 +00:00
Sandro 41edfe8c20
Merge pull request #113295 from siraben/cc-eq-cc 2021-02-19 19:25:41 +01:00
github-actions[bot] daab056dd9
Merge staging-next into staging 2021-02-19 18:16:58 +00:00
Ben Siraphob 223f25cf4a treewide: add targetPrefix to hardcoded references to CC=cc 2021-02-20 01:01:46 +07:00
AndersonTorres 111256a480 dap: init at 3.10 2021-02-19 10:24:24 -03:00
Ben Siraphob e03c068af5 treewide: makeWrapper buildInputs to nativeBuildInputs 2021-02-19 20:09:16 +07:00
R. RyanTM 71e52071fc calc: 2.12.7.6 -> 2.12.8.1 2021-02-18 06:00:33 +00:00
idontgetoutmuch 5eabb050be
R: fix dylib install_name (#113002) 
Co-authored-by: zseri <zseri.devel@ytrizja.de>
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
 2021-02-15 03:08:02 +01:00
R. RyanTM 390c686021 calc: 2.12.7.2 -> 2.12.7.6 2021-02-06 08:43:11 +00:00
Lucas Ransan c0726b30b6
rofi-calc: 1.9 -> 2.0.0 2021-02-04 13:40:34 +01:00
Sandro Jäckel ced3ec6ce3
treewide: update permanent url redirects 2021-01-30 21:48:57 +01:00
R. RyanTM af91d02593 gretl: 2020e -> 2021a 2021-01-30 01:29:56 +00:00
Sandro d17f76f05a
Merge pull request #108172 from sikmir/geogebra 
geogebra: 5-0-609-0 → 5-0-620-0, geogebra6: 6-0-609-0 → 6-0-620-0
 2021-01-29 02:19:06 +01:00
Pavol Rusnak a6ce00c50c
treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
Sandro a36bf6faf9
Merge pull request #101796 from luc65r/pkg/tilp2 2021-01-25 01:11:50 +01:00
luc65r 3c5f402e6e
tilp2: init at 1.18 2021-01-24 14:06:41 +01:00
luc65r 99d0610e03
gfm: init at 1.08 2021-01-24 14:06:41 +01:00
volth bc0d605cf1 treewide: fix double quoted strings in meta.description 
Signed-off-by: Ben Siraphob <bensiraphob@gmail.com>
 2021-01-24 19:56:59 +07:00
Markus Kowalewski 6dba41fbcb
mpi: use mpi attribute consistently as the default MPI implementations 
Use the attribute mpi to provide a system wide default MPI
implementation. The default is openmpi (as before).
This now allows for overriding the MPI implentation by using
the overlay mechanism. Build all packages with mpich instead
of the default openmpi can now be achived like this:
self: super:
 {
   mpi = super.mpich;
 }

All derivations that have been using "mpi ? null" to provide optional
building with MPI have been change in the following way to allow for
optional builds with MPI:
{ ...
, mpi
, useMpi ? false
}
 2021-01-23 12:15:13 +01:00
Jonathan Ringer 9bb3fccb5b treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix 
continuation of #109595

pkgconfig was aliased in 2018, however, it remained in
all-packages.nix due to its wide usage. This cleans
up the remaining references to pkgs.pkgsconfig and
moves the entry to aliases.nix.

python3Packages.pkgconfig remained unchanged because
it's the canonical name of the upstream package
on pypi.
 2021-01-19 01:16:25 -08:00
Ben Siraphob badf51221d treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
Sandro Jäckel 55444ed07f
nasc: Fix compilation with gcc10 2021-01-11 12:08:20 +01:00
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib; 
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
 2021-01-11 10:38:22 +01:00
Nikolay Korotkiy c0575fe0ef
geogebra: 5-0-609-0 → 5-0-620-0, geogebra6: 6-0-609-0 → 6-0-620-0 2021-01-10 20:19:43 +03:00
github-actions[bot] ecebf82121
Merge master into staging-next 2021-01-08 12:29:36 +00:00
Dyazz 8cdefb6995 qalculate-gtk: 3.15.0 -> 3.16.0 2021-01-08 08:43:39 +01:00
Jan Tojnar f19eb635b4
Merge branch 'master' into staging-next 
b04fc593e7 seems to have accidentally changed mkDerivation function for dfilemanager and solarus-quest-editor so I have reverted that here.
 2021-01-07 13:04:31 +01:00
Сухарик 4746e1717f
sympy: 1.6.2 -> 1.7.1 (#107663) 
* sympy: 1.6.2 -> 1.7.1

* sage: adapt tests to sympy 1.7

Co-authored-by: Mauricio Collares <mauricio@collares.org>
 2021-01-06 17:10:30 +00:00
Ben Siraphob 3ae5e6ce03 treewide: remove enableParallelBuilding = true if using cmake 2021-01-03 18:37:40 +07:00
Maximilian Bosch e7d1be840c
treewide: remove maintainership of ma27 from a few packages 
Those are packages I don't use anymore for a longer time and I therefore
don't think that listing me as maintainer is a good idea. If those
should be removed now, I'd be fine with that.

SuperSandro2000 will take care of a few packages[1].

[1] https://github.com/NixOS/nixpkgs/pull/108126#pullrequestreview-560599381
 2021-01-01 19:48:01 +01:00
Pavol Rusnak 1017eb06b1
Merge pull request #101227 from herberteuler/fix/mathematica-12.1.1-opencv4 
mathematica: use opencv4
 2020-12-29 23:41:09 +01:00
freezeboy 3c89e637e8 bcal: 1.9 -> 2.2 2020-12-27 17:52:28 +01:00
FliegendeWurst e49c1a0027
mathematica: 12.1.1 -> 12.2.0 (#107309) 2020-12-21 12:55:28 -05:00
Mauricio Collares 8100c5a44b sage: 8.9 -> 9.2 fixups 2020-12-15 16:51:42 -03:00
Mauricio Collares 8b8cae779f pari: update tarball location, since it moved 2020-12-15 16:46:43 -03:00
Mauricio Collares 4058e45736 nauty: update tarball sha256 
The old `nauty` tarball is currently accessible at
https://distfiles.macports.org/nauty/nauty27r1.tar.gz. The diff is a
single line in genbg.c:

-    SUMMARY(&nout,t2-t1);
+    SUMMARY(nout,t2-t1);
 2020-12-15 16:46:43 -03:00
Mauricio Collares cf6364bed2 pynac: import patch to avoid deprecation warnings on python3.8 2020-12-14 19:24:19 -03:00
Mauricio Collares 5df948d4cc giac: 1.5.0-21 -> 1.5.0-87 2020-12-14 19:24:18 -03:00
Masanori Ogino 5c4136daf7 sage: 8.9 -> 9.2 2020-12-14 19:24:18 -03:00
Sandro 30cdc8be48
Merge pull request #105650 from r-ryantm/auto-update/gretl 
gretl: 2020b -> 2020e
 2020-12-02 20:22:27 +01:00
R. RyanTM cf89444f1e gmsh: 4.7.0 -> 4.7.1 2020-12-02 05:50:47 +00:00
R. RyanTM f9a694106b gretl: 2020b -> 2020e 2020-12-02 04:45:07 +00:00
Sandro 2c0389680c
Merge pull request #90075 from dmrauh/add/gretl 
gretl: init at 2020b
 2020-11-28 22:10:05 +01:00
Dominik Michael Rauh 5f10cd5e0b
gretl: init at 2020b 2020-11-28 21:37:30 +01:00
Sandro ec421ca248
Merge pull request #100532 from piegamesde/fix-desktopitems 
treewide: Fix broken desktop files and mark packages as broken
 2020-11-27 22:27:59 +01:00
Sandro b08b773f24
Merge pull request #101807 from cheriimoya/pspp 
pspp 1.2.0 -> 1.4.1
 2020-11-27 00:35:16 +01:00
Gabriel Ebner 56ffa7a9e4
Merge pull request #105055 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.14.0 -> 3.15.0
 2020-11-26 19:04:24 +01:00
R. RyanTM 8c1f644cc7 qalculate-gtk: 3.14.0 -> 3.15.0 2020-11-26 17:48:20 +00:00
Graham Christensen bc49a0815a
utillinux: rename to util-linux 2020-11-24 12:42:06 -05:00
Sandro b3f5ff2005
Merge pull request #103703 from r-ryantm/auto-update/gmsh 
gmsh: 4.6.0 -> 4.7.0
 2020-11-24 01:57:36 +01:00
Martin Lavoie 30afa507a3 pynac: use python3 instead of python2 2020-11-20 20:46:43 +01:00
Ben Gamari 7263f7c433
mathematica: Prefer building locally (#100856) 
There is little benefit to copying a 4GB tarball over the network,
just to perform an I/O-bound operation and then copy the
multi-gigabyte result back.
 2020-11-19 19:42:22 -05:00
Timo Kaufmann b7319d2d35 maintainers: add raskin to the sage team 
https://github.com/NixOS/nixpkgs/pull/104083#issuecomment-729168625
 2020-11-18 21:29:24 +01:00
Timo Kaufmann ff8338343b maintainers: create sage team 
Maintaining all the packages whose updates might break some aspect of
sage.

For reference:
https://github.com/NixOS/nixpkgs/pull/103810#issuecomment-727536510
 2020-11-18 21:27:37 +01:00
R. RyanTM 3457f85820 gp2c: 0.0.11pl4 -> 0.0.12 2020-11-13 14:37:53 +00:00
R. RyanTM a36f37b778 gmsh: 4.6.0 -> 4.7.0 2020-11-13 14:19:59 +00:00
R. RyanTM 3664e4929f qalculate-gtk: 3.13.0 -> 3.14.0 2020-11-10 01:49:59 +00:00
Masanori Ogino 88de0d7354
maxima: 5.42.2 -> 5.44.0 (#102861) 
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.43.md
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.44.md
Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-11-08 19:29:53 -05:00
R. RyanTM 036cec187c ginac: 1.7.9 -> 1.8.0 2020-11-01 17:19:05 -08:00
Maximilian Bosch 952dc5c7ff
Merge pull request #101421 from sikmir/geogebra 
geogebra: 5-0-593-0 -> 5-0-609-0, geogebra6: 6-0-600-0 -> 6-0-609-0
 2020-10-30 23:39:37 +01:00
Ben Siraphob db74029e3e treewide: remove package names from prefix of descriptions 2020-10-27 09:15:07 -07:00
Max Hausch 8fb91897f4
pspp 1.2.0 -> 1.4.1 2020-10-27 01:10:37 +01:00
Masanori Ogino 40fb3ed6dc maxima: remove 5.41.0 
It had been kept for SageMath, but it uses the default version nowadays
and this version is not referenced in nixpkgs.

Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-10-27 06:09:12 +09:00
Maximilian Bosch 61fa498994
Merge pull request #101646 from luc65r/pkg/rofi-calc 
rofi-calc: 1.8 -> 1.9
 2020-10-26 16:36:43 +01:00
Peter Simons 40bc6c8dad
Merge pull request #100393 from matthiasbeyer/update-r 
R: 4.0.2 -> 4.0.3
 2020-10-25 21:57:03 +01:00
Lucas Ransan 2436e41916 rofi-calc: 1.8 -> 1.9 2020-10-25 14:31:57 +01:00
Nikolay Korotkiy a2472ebfb1
geogebra: 5-0-593-0 -> 5-0-609-0, geogebra6: 6-0-600-0 -> 6-0-609-0 2020-10-23 19:25:11 +03:00
Guanpeng Xu efe94c085b mathematica: use opencv4 
The default opencv2 is marked broken at 5e68d203, and it is suggested
there that the current release is 4.x.
 2020-10-21 08:36:54 +08:00
Masanori Ogino 096ef94717 gfan: fix build failures with cddlib v0.94l 
It fixes https://github.com/NixOS/nixpkgs/issues/100622.

Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-10-19 10:29:01 +09:00
Ben Siraphob 683a87dbeb treewide: remove periods from end of package descriptions 2020-10-17 08:22:31 -07:00
piegames e14a359896 treewide: Fix broken desktop files and mark packages as broken 
This fixes all packages that are failed `nixpkgs-review` in #91790.
Packages that were broken prior to that PR were marked as broken.
Packages that failed because of #75729 were fixed.
 2020-10-15 15:14:51 +02:00
Matthias Beyer ea4a13e573 R: 4.0.2 -> 4.0.3 
Signed-off-by: Matthias Beyer <mail@beyermatthias.de>
 2020-10-13 10:05:15 +02:00